Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.2□□□□□ -1.58
Sox17Q61473 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox17Q61473 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Sox17Q61473 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sox17Q61473 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Sox17Q61473 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.19□□□□□ -1.58
Sox17Q61473 Mir706-201ENSMUST00000102262 84 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Gm2288-201ENSMUST00000118560 638 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Gm11826-201ENSMUST00000118781 438 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Gm15660-201ENSMUST00000118997 478 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Gm11484-201ENSMUST00000119808 338 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Gm13676-201ENSMUST00000122185 591 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Gm25291-201ENSMUST00000122795 144 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.19□□□□□ -1.58
Sox17Q61473 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sox17Q61473 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.19□□□□□ -1.58
Sox17Q61473 Gm5125-201ENSMUST00000148614 624 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Gm26000-201ENSMUST00000157991 107 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Gm21999-201ENSMUST00000165985 387 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Sox17Q61473 Gm10087-201ENSMUST00000167650 330 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sox17Q61473 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sox17Q61473 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.19□□□□□ -1.58
Sox17Q61473 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC5.19□□□□□ -1.58
Sox17Q61473 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC5.19□□□□□ -1.58
Sox17Q61473 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC5.19□□□□□ -1.58
Sox17Q61473 Gm29664-201ENSMUST00000191125 463 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Gm38201-201ENSMUST00000192143 387 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Gm18984-201ENSMUST00000193998 1124 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Gm38154-201ENSMUST00000195444 340 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Gm31306-201ENSMUST00000197517 508 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC5.19□□□□□ -1.58
Sox17Q61473 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC5.19□□□□□ -1.58
Sox17Q61473 Gm29815-201ENSMUST00000202418 178 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Sox17Q61473 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sox17Q61473 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 AC124356.2-201ENSMUST00000221874 336 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 AC135086.1-201ENSMUST00000228621 817 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Gm8256-203ENSMUST00000228692 591 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Snord59a-201ENSMUST00000082844 74 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Mir350-201ENSMUST00000083639 99 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sox17Q61473 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Sox17Q61473 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
Sox17Q61473 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
Sox17Q61473 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.19□□□□□ -1.58
Sox17Q61473 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox17Q61473 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox17Q61473 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox17Q61473 Gm7171-201ENSMUST00000177413 1349 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox17Q61473 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.19□□□□□ -1.58
Sox17Q61473 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sox17Q61473 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Sox17Q61473 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox17Q61473 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox17Q61473 AC155710.1-201ENSMUST00000219913 1353 ntBASIC5.18□□□□□ -1.58
Sox17Q61473 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sox17Q61473 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox17Q61473 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Sox17Q61473 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.18□□□□□ -1.58
Sox17Q61473 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Sox17Q61473 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Sox17Q61473 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox17Q61473 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox17Q61473 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.18□□□□□ -1.58
Sox17Q61473 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.18□□□□□ -1.58
Sox17Q61473 Snord65-201ENSMUST00000104269 72 ntBASIC5.18□□□□□ -1.58
Sox17Q61473 Gm12656-201ENSMUST00000118149 577 ntBASIC5.18□□□□□ -1.58
Sox17Q61473 Gm15332-201ENSMUST00000118386 357 ntBASIC5.18□□□□□ -1.58
Sox17Q61473 Gm14472-201ENSMUST00000119815 282 ntBASIC5.18□□□□□ -1.58
Sox17Q61473 Gm14563-201ENSMUST00000120571 354 ntBASIC5.18□□□□□ -1.58
Sox17Q61473 Gm14620-201ENSMUST00000120656 383 ntBASIC5.18□□□□□ -1.58
Sox17Q61473 Gm7746-201ENSMUST00000120966 503 ntBASIC5.18□□□□□ -1.58
Sox17Q61473 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.18□□□□□ -1.58
Sox17Q61473 Gm7309-201ENSMUST00000121670 581 ntBASIC5.18□□□□□ -1.58
Sox17Q61473 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sox17Q61473 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sox17Q61473 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Sox17Q61473 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC5.18□□□□□ -1.58
Sox17Q61473 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sox17Q61473 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Sox17Q61473 Gm23806-201ENSMUST00000175157 109 ntBASIC5.18□□□□□ -1.58
Sox17Q61473 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5.18□□□□□ -1.58
Sox17Q61473 Gm1972-201ENSMUST00000181606 964 ntBASIC5.18□□□□□ -1.58
Sox17Q61473 Gm29513-201ENSMUST00000185741 202 ntBASIC5.18□□□□□ -1.58
Sox17Q61473 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.18□□□□□ -1.58
Sox17Q61473 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sox17Q61473 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms