Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Col17a1Q07563 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col17a1Q07563 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Col17a1Q07563 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col17a1Q07563 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col17a1Q07563 Gm43766-201ENSMUST00000200590 5417 ntBASIC8.54□□□□□ -1.04
Col17a1Q07563 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col17a1Q07563 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col17a1Q07563 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Col17a1Q07563 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col17a1Q07563 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col17a1Q07563 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col17a1Q07563 Gm44068-201ENSMUST00000204049 2128 ntBASIC8.54□□□□□ -1.04
Col17a1Q07563 Gm45477-201ENSMUST00000200213 5498 ntBASIC8.54□□□□□ -1.04
Col17a1Q07563 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Col17a1Q07563 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Col17a1Q07563 Gm24541-201ENSMUST00000103871 96 ntBASIC8.54□□□□□ -1.04
Col17a1Q07563 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC8.54□□□□□ -1.04
Col17a1Q07563 Gm15333-201ENSMUST00000118825 364 ntBASIC8.54□□□□□ -1.04
Col17a1Q07563 Gm13740-201ENSMUST00000120590 310 ntBASIC8.54□□□□□ -1.04
Col17a1Q07563 Gm5809-201ENSMUST00000121854 529 ntBASIC8.54□□□□□ -1.04
Col17a1Q07563 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC8.54□□□□□ -1.04
Col17a1Q07563 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Col17a1Q07563 Gm32308-201ENSMUST00000203053 280 ntBASIC8.54□□□□□ -1.04
Col17a1Q07563 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col17a1Q07563 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC8.54□□□□□ -1.04
Col17a1Q07563 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Col17a1Q07563 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Col17a1Q07563 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Col17a1Q07563 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col17a1Q07563 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Col17a1Q07563 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col17a1Q07563 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Col17a1Q07563 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Col17a1Q07563 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC8.54□□□□□ -1.04
Col17a1Q07563 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col17a1Q07563 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Col17a1Q07563 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col17a1Q07563 AC124183.1-201ENSMUST00000222367 2135 ntBASIC8.54□□□□□ -1.04
Col17a1Q07563 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col17a1Q07563 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC8.54□□□□□ -1.04
Col17a1Q07563 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Col17a1Q07563 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col17a1Q07563 AC153971.1-201ENSMUST00000215097 3811 ntBASIC8.53□□□□□ -1.04
Col17a1Q07563 AC155298.1-201ENSMUST00000225350 3250 ntBASIC8.53□□□□□ -1.04
Col17a1Q07563 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col17a1Q07563 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col17a1Q07563 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Col17a1Q07563 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Col17a1Q07563 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Col17a1Q07563 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Col17a1Q07563 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Col17a1Q07563 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Col17a1Q07563 Gm12115-201ENSMUST00000119969 447 ntBASIC8.53□□□□□ -1.04
Col17a1Q07563 Gm13232-201ENSMUST00000121816 632 ntBASIC8.53□□□□□ -1.04
Col17a1Q07563 Gm11834-201ENSMUST00000122257 585 ntBASIC8.53□□□□□ -1.04
Col17a1Q07563 Gm22819-201ENSMUST00000157445 303 ntBASIC8.53□□□□□ -1.04
Col17a1Q07563 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC8.53□□□□□ -1.04
Col17a1Q07563 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Col17a1Q07563 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC8.53□□□□□ -1.04
Col17a1Q07563 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC8.53□□□□□ -1.04
Col17a1Q07563 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC8.53□□□□□ -1.04
Col17a1Q07563 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC8.53□□□□□ -1.04
Col17a1Q07563 Gm18387-201ENSMUST00000220333 702 ntBASIC8.53□□□□□ -1.04
Col17a1Q07563 AC161609.1-201ENSMUST00000225878 474 ntBASIC8.53□□□□□ -1.04
Col17a1Q07563 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Col17a1Q07563 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Col17a1Q07563 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Col17a1Q07563 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Col17a1Q07563 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Col17a1Q07563 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col17a1Q07563 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col17a1Q07563 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Col17a1Q07563 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Col17a1Q07563 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Col17a1Q07563 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col17a1Q07563 Gm42843-201ENSMUST00000196328 3616 ntBASIC8.53□□□□□ -1.04
Col17a1Q07563 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Col17a1Q07563 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col17a1Q07563 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC8.53□□□□□ -1.04
Col17a1Q07563 Gm38368-201ENSMUST00000193181 1335 ntBASIC8.53□□□□□ -1.04
Col17a1Q07563 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC8.53□□□□□ -1.04
Col17a1Q07563 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC8.53□□□□□ -1.04
Col17a1Q07563 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Col17a1Q07563 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Col17a1Q07563 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.04
Col17a1Q07563 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC8.52□□□□□ -1.05
Col17a1Q07563 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC8.52□□□□□ -1.05
Col17a1Q07563 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col17a1Q07563 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col17a1Q07563 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC8.52□□□□□ -1.05
Col17a1Q07563 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC8.52□□□□□ -1.05
Col17a1Q07563 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col17a1Q07563 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC8.52□□□□□ -1.05
Col17a1Q07563 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC8.52□□□□□ -1.05
Col17a1Q07563 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC8.52□□□□□ -1.05
Col17a1Q07563 Gm19880-201ENSMUST00000207731 318 ntBASIC8.52□□□□□ -1.05
Col17a1Q07563 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC8.52□□□□□ -1.05
Col17a1Q07563 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Col17a1Q07563 AC165347.1-201ENSMUST00000224089 1025 ntBASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms