Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NcanP55066 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NcanP55066 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NcanP55066 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NcanP55066 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NcanP55066 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
NcanP55066 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NcanP55066 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
NcanP55066 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.93□□□□□ -1.46
NcanP55066 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NcanP55066 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NcanP55066 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.93□□□□□ -1.46
NcanP55066 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NcanP55066 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
NcanP55066 Gm9597-202ENSMUST00000227632 1387 ntBASIC5.93□□□□□ -1.46
NcanP55066 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
NcanP55066 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NcanP55066 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
NcanP55066 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.92□□□□□ -1.46
NcanP55066 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
NcanP55066 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.92□□□□□ -1.46
NcanP55066 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
NcanP55066 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
NcanP55066 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.92□□□□□ -1.46
NcanP55066 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
NcanP55066 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NcanP55066 Gm24982-201ENSMUST00000104456 132 ntBASIC5.92□□□□□ -1.46
NcanP55066 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
NcanP55066 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.92□□□□□ -1.46
NcanP55066 Mir1907-201ENSMUST00000122509 90 ntBASIC5.92□□□□□ -1.46
NcanP55066 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NcanP55066 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.92□□□□□ -1.46
NcanP55066 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.92□□□□□ -1.46
NcanP55066 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.92□□□□□ -1.46
NcanP55066 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
NcanP55066 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC5.92□□□□□ -1.46
NcanP55066 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
NcanP55066 Gm9442-201ENSMUST00000194242 319 ntBASIC5.92□□□□□ -1.46
NcanP55066 Gm21461-201ENSMUST00000200382 863 ntBASIC5.92□□□□□ -1.46
NcanP55066 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC5.92□□□□□ -1.46
NcanP55066 Gm44757-201ENSMUST00000206373 157 ntBASIC5.92□□□□□ -1.46
NcanP55066 Gm45610-201ENSMUST00000209227 784 ntBASIC5.92□□□□□ -1.46
NcanP55066 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.92□□□□□ -1.46
NcanP55066 AC109180.1-201ENSMUST00000218676 398 ntBASIC5.92□□□□□ -1.46
NcanP55066 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.92□□□□□ -1.46
NcanP55066 AC132112.1-201ENSMUST00000226354 505 ntBASIC5.92□□□□□ -1.46
NcanP55066 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NcanP55066 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NcanP55066 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.92□□□□□ -1.46
NcanP55066 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.92□□□□□ -1.46
NcanP55066 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NcanP55066 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NcanP55066 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
NcanP55066 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
NcanP55066 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
NcanP55066 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
NcanP55066 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
NcanP55066 AC022682.2-202ENSMUST00000224394 3943 ntBASIC5.92□□□□□ -1.46
NcanP55066 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
NcanP55066 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NcanP55066 Gm43528-201ENSMUST00000199492 1674 ntBASIC5.91□□□□□ -1.46
NcanP55066 AC153971.1-201ENSMUST00000215097 3811 ntBASIC5.91□□□□□ -1.46
NcanP55066 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
NcanP55066 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
NcanP55066 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NcanP55066 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
NcanP55066 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC5.91□□□□□ -1.46
NcanP55066 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NcanP55066 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
NcanP55066 Gm11912-201ENSMUST00000117235 264 ntBASIC5.91□□□□□ -1.46
NcanP55066 Gm14620-201ENSMUST00000120656 383 ntBASIC5.91□□□□□ -1.46
NcanP55066 Gm25176-201ENSMUST00000122640 125 ntBASIC5.91□□□□□ -1.46
NcanP55066 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.91□□□□□ -1.46
NcanP55066 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
NcanP55066 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NcanP55066 Gm38046-201ENSMUST00000192733 550 ntBASIC5.91□□□□□ -1.46
NcanP55066 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NcanP55066 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NcanP55066 Gm43408-201ENSMUST00000198263 440 ntBASIC5.91□□□□□ -1.46
NcanP55066 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
NcanP55066 Gm42581-201ENSMUST00000201774 966 ntBASIC5.91□□□□□ -1.46
NcanP55066 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.91□□□□□ -1.46
NcanP55066 Gm45259-201ENSMUST00000209217 1006 ntBASIC5.91□□□□□ -1.46
NcanP55066 Gm6009-201ENSMUST00000210848 280 ntBASIC5.91□□□□□ -1.46
NcanP55066 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC5.91□□□□□ -1.46
NcanP55066 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NcanP55066 Gm2099-201ENSMUST00000220979 412 ntBASIC5.91□□□□□ -1.46
NcanP55066 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NcanP55066 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.91□□□□□ -1.46
NcanP55066 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
NcanP55066 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC5.91□□□□□ -1.46
NcanP55066 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.91□□□□□ -1.46
NcanP55066 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.91□□□□□ -1.46
NcanP55066 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.91□□□□□ -1.46
NcanP55066 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NcanP55066 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.91□□□□□ -1.46
NcanP55066 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
NcanP55066 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
NcanP55066 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
NcanP55066 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms