Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col2a1P28481 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col2a1P28481 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col2a1P28481 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col2a1P28481 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
Col2a1P28481 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col2a1P28481 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.09□□□□□ -1.43
Col2a1P28481 Gm23948-201ENSMUST00000104030 132 ntBASIC6.09□□□□□ -1.43
Col2a1P28481 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Col2a1P28481 Gm17014-201ENSMUST00000120765 168 ntBASIC6.09□□□□□ -1.43
Col2a1P28481 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col2a1P28481 Gm16345-201ENSMUST00000146065 158 ntBASIC6.09□□□□□ -1.43
Col2a1P28481 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC6.09□□□□□ -1.43
Col2a1P28481 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC6.09□□□□□ -1.43
Col2a1P28481 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col2a1P28481 Mir6943-201ENSMUST00000185186 66 ntBASIC6.09□□□□□ -1.43
Col2a1P28481 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col2a1P28481 Ighv6-2-201ENSMUST00000192430 295 ntBASIC6.09□□□□□ -1.43
Col2a1P28481 Gm44214-201ENSMUST00000204153 606 ntBASIC6.09□□□□□ -1.43
Col2a1P28481 AC141425.1-201ENSMUST00000224989 265 ntBASIC6.09□□□□□ -1.43
Col2a1P28481 AC116724.1-201ENSMUST00000227900 972 ntBASIC6.09□□□□□ -1.43
Col2a1P28481 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Col2a1P28481 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Col2a1P28481 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col2a1P28481 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col2a1P28481 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col2a1P28481 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.09□□□□□ -1.43
Col2a1P28481 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col2a1P28481 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.09□□□□□ -1.43
Col2a1P28481 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.09□□□□□ -1.43
Col2a1P28481 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC6.09□□□□□ -1.43
Col2a1P28481 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col2a1P28481 Gm37183-201ENSMUST00000191712 3405 ntBASIC6.09□□□□□ -1.43
Col2a1P28481 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
Col2a1P28481 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.44
Col2a1P28481 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
Col2a1P28481 Gm12641-201ENSMUST00000117874 985 ntBASIC6.09□□□□□ -1.44
Col2a1P28481 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Col2a1P28481 Gm26350-201ENSMUST00000157531 288 ntBASIC6.09□□□□□ -1.44
Col2a1P28481 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.09□□□□□ -1.44
Col2a1P28481 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Col2a1P28481 Gm8993-201ENSMUST00000182182 983 ntBASIC6.09□□□□□ -1.44
Col2a1P28481 Mir7012-201ENSMUST00000183900 64 ntBASIC6.09□□□□□ -1.44
Col2a1P28481 Gm6717-201ENSMUST00000185549 838 ntBASIC6.09□□□□□ -1.44
Col2a1P28481 BX530055.1-201ENSMUST00000197285 122 ntBASIC6.09□□□□□ -1.44
Col2a1P28481 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC6.09□□□□□ -1.44
Col2a1P28481 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Col2a1P28481 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
Col2a1P28481 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.44
Col2a1P28481 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col2a1P28481 AC151734.1-201ENSMUST00000227023 1740 ntBASIC6.08□□□□□ -1.44
Col2a1P28481 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Col2a1P28481 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col2a1P28481 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col2a1P28481 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col2a1P28481 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col2a1P28481 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.08□□□□□ -1.44
Col2a1P28481 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col2a1P28481 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col2a1P28481 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col2a1P28481 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col2a1P28481 Gm11346-201ENSMUST00000118346 704 ntBASIC6.08□□□□□ -1.44
Col2a1P28481 Gm11909-201ENSMUST00000121424 759 ntBASIC6.08□□□□□ -1.44
Col2a1P28481 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC6.08□□□□□ -1.44
Col2a1P28481 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC6.08□□□□□ -1.44
Col2a1P28481 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col2a1P28481 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Col2a1P28481 Esd-ps-201ENSMUST00000170684 847 ntBASIC6.08□□□□□ -1.44
Col2a1P28481 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC6.08□□□□□ -1.44
Col2a1P28481 Gm5334-201ENSMUST00000187472 720 ntBASIC6.08□□□□□ -1.44
Col2a1P28481 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col2a1P28481 Gm8999-201ENSMUST00000204951 969 ntBASIC6.08□□□□□ -1.44
Col2a1P28481 Gm19921-201ENSMUST00000210505 703 ntBASIC6.08□□□□□ -1.44
Col2a1P28481 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC6.08□□□□□ -1.44
Col2a1P28481 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC6.08□□□□□ -1.44
Col2a1P28481 CT030238.1-201ENSMUST00000228393 442 ntBASIC6.08□□□□□ -1.44
Col2a1P28481 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col2a1P28481 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col2a1P28481 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col2a1P28481 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.08□□□□□ -1.44
Col2a1P28481 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col2a1P28481 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Col2a1P28481 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col2a1P28481 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col2a1P28481 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col2a1P28481 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC6.07□□□□□ -1.44
Col2a1P28481 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC6.07□□□□□ -1.44
Col2a1P28481 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col2a1P28481 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col2a1P28481 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col2a1P28481 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col2a1P28481 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC6.07□□□□□ -1.44
Col2a1P28481 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.07□□□□□ -1.44
Col2a1P28481 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col2a1P28481 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col2a1P28481 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.07□□□□□ -1.44
Col2a1P28481 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col2a1P28481 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col2a1P28481 Gm16149-201ENSMUST00000117631 309 ntBASIC6.07□□□□□ -1.44
Col2a1P28481 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms