Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx1P18111 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx1P18111 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx1P18111 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx1P18111 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdx1P18111 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdx1P18111 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Cdx1P18111 Gm44750-201ENSMUST00000206185 2223 ntBASIC4.56□□□□□ -1.68
Cdx1P18111 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Cdx1P18111 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Cdx1P18111 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdx1P18111 Gm8872-201ENSMUST00000197475 1341 ntBASIC4.56□□□□□ -1.68
Cdx1P18111 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Cdx1P18111 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Cdx1P18111 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Cdx1P18111 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Cdx1P18111 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Cdx1P18111 Gm15779-201ENSMUST00000117470 412 ntBASIC4.56□□□□□ -1.68
Cdx1P18111 Gm15332-201ENSMUST00000118386 357 ntBASIC4.56□□□□□ -1.68
Cdx1P18111 Gm14805-201ENSMUST00000120172 340 ntBASIC4.56□□□□□ -1.68
Cdx1P18111 Gm12110-201ENSMUST00000121601 579 ntBASIC4.56□□□□□ -1.68
Cdx1P18111 Gm14237-201ENSMUST00000122080 430 ntBASIC4.56□□□□□ -1.68
Cdx1P18111 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Cdx1P18111 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC4.56□□□□□ -1.68
Cdx1P18111 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC4.56□□□□□ -1.68
Cdx1P18111 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC4.56□□□□□ -1.68
Cdx1P18111 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Cdx1P18111 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC4.56□□□□□ -1.68
Cdx1P18111 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Cdx1P18111 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Cdx1P18111 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Cdx1P18111 Gm43315-201ENSMUST00000198120 313 ntBASIC4.56□□□□□ -1.68
Cdx1P18111 Gm5554-201ENSMUST00000199726 1206 ntBASIC4.56□□□□□ -1.68
Cdx1P18111 Gm43105-201ENSMUST00000202987 459 ntBASIC4.56□□□□□ -1.68
Cdx1P18111 Gm44307-201ENSMUST00000204466 764 ntBASIC4.56□□□□□ -1.68
Cdx1P18111 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC4.56□□□□□ -1.68
Cdx1P18111 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Cdx1P18111 AC135353.1-201ENSMUST00000215330 630 ntBASIC4.56□□□□□ -1.68
Cdx1P18111 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC4.56□□□□□ -1.68
Cdx1P18111 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC4.56□□□□□ -1.68
Cdx1P18111 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Cdx1P18111 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Cdx1P18111 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC4.56□□□□□ -1.68
Cdx1P18111 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdx1P18111 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.56□□□□□ -1.68
Cdx1P18111 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Cdx1P18111 Gm19136-201ENSMUST00000190706 2067 ntBASIC4.56□□□□□ -1.68
Cdx1P18111 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Cdx1P18111 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC4.56□□□□□ -1.68
Cdx1P18111 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.56□□□□□ -1.68
Cdx1P18111 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.56□□□□□ -1.68
Cdx1P18111 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdx1P18111 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdx1P18111 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Cdx1P18111 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Cdx1P18111 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cdx1P18111 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cdx1P18111 Gm37101-201ENSMUST00000191656 3660 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cdx1P18111 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cdx1P18111 Gm12643-201ENSMUST00000116078 374 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Gm11624-201ENSMUST00000118579 1041 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Gm11699-201ENSMUST00000119016 401 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Gm11325-201ENSMUST00000119967 469 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Gm11990-201ENSMUST00000121505 897 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Gm24382-201ENSMUST00000122698 107 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 n-R5s19-201ENSMUST00000122793 120 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC4.55□□□□□ -1.68
Cdx1P18111 Gm26352-201ENSMUST00000158223 125 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Gm23179-201ENSMUST00000158693 304 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cdx1P18111 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cdx1P18111 Gm20453-201ENSMUST00000173968 226 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC4.55□□□□□ -1.68
Cdx1P18111 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Cdx1P18111 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Cdx1P18111 Gm7952-201ENSMUST00000180540 984 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Gm27030-201ENSMUST00000182551 464 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC4.55□□□□□ -1.68
Cdx1P18111 Mir7653-201ENSMUST00000184358 61 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC4.55□□□□□ -1.68
Cdx1P18111 Mir6418-201ENSMUST00000185075 115 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC4.55□□□□□ -1.68
Cdx1P18111 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cdx1P18111 Gm6631-201ENSMUST00000193699 559 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Ighv1-27-201ENSMUST00000194473 340 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.55□□□□□ -1.68
Cdx1P18111 Gm7626-201ENSMUST00000195801 353 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Gm42753-201ENSMUST00000196718 1268 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Gm18839-201ENSMUST00000204292 670 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Gm44604-201ENSMUST00000205475 496 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Gm44580-201ENSMUST00000206333 877 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC4.55□□□□□ -1.68
Cdx1P18111 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC4.55□□□□□ -1.68
Cdx1P18111 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC4.55□□□□□ -1.68
Cdx1P18111 AC119894.1-201ENSMUST00000220399 350 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Gm5830-201ENSMUST00000049117 443 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cdx1P18111 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms