Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col1a1P11087 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col1a1P11087 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col1a1P11087 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC6.3□□□□□ -1.4
Col1a1P11087 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col1a1P11087 Gm38190-201ENSMUST00000192350 4755 ntBASIC6.3□□□□□ -1.4
Col1a1P11087 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Col1a1P11087 Gm44751-201ENSMUST00000208302 4387 ntBASIC6.3□□□□□ -1.4
Col1a1P11087 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.3□□□□□ -1.4
Col1a1P11087 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.3□□□□□ -1.4
Col1a1P11087 Gm37217-201ENSMUST00000194017 3521 ntBASIC6.3□□□□□ -1.4
Col1a1P11087 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.3□□□□□ -1.4
Col1a1P11087 Gm43027-201ENSMUST00000202906 3691 ntBASIC6.29□□□□□ -1.4
Col1a1P11087 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col1a1P11087 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.29□□□□□ -1.4
Col1a1P11087 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col1a1P11087 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col1a1P11087 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col1a1P11087 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col1a1P11087 Gm22020-201ENSMUST00000104358 136 ntBASIC6.29□□□□□ -1.4
Col1a1P11087 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col1a1P11087 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col1a1P11087 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col1a1P11087 Gm14388-201ENSMUST00000118119 477 ntBASIC6.29□□□□□ -1.4
Col1a1P11087 Gm11833-201ENSMUST00000118393 853 ntBASIC6.29□□□□□ -1.4
Col1a1P11087 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Col1a1P11087 Gm36986-201ENSMUST00000195320 353 ntBASIC6.29□□□□□ -1.4
Col1a1P11087 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.29□□□□□ -1.4
Col1a1P11087 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col1a1P11087 AC125190.2-201ENSMUST00000221160 497 ntBASIC6.29□□□□□ -1.4
Col1a1P11087 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col1a1P11087 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col1a1P11087 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.29□□□□□ -1.4
Col1a1P11087 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col1a1P11087 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC6.29□□□□□ -1.4
Col1a1P11087 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.29□□□□□ -1.4
Col1a1P11087 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col1a1P11087 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Col1a1P11087 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col1a1P11087 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col1a1P11087 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col1a1P11087 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col1a1P11087 Gm42662-201ENSMUST00000202539 1431 ntBASIC6.29□□□□□ -1.4
Col1a1P11087 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col1a1P11087 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.29□□□□□ -1.4
Col1a1P11087 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col1a1P11087 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col1a1P11087 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.29□□□□□ -1.4
Col1a1P11087 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col1a1P11087 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Col1a1P11087 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col1a1P11087 Gm24125-201ENSMUST00000104105 137 ntBASIC6.28□□□□□ -1.4
Col1a1P11087 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col1a1P11087 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC6.28□□□□□ -1.4
Col1a1P11087 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC6.28□□□□□ -1.4
Col1a1P11087 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col1a1P11087 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.28□□□□□ -1.4
Col1a1P11087 Gm42643-201ENSMUST00000200504 279 ntBASIC6.28□□□□□ -1.4
Col1a1P11087 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC6.28□□□□□ -1.4
Col1a1P11087 Gm44074-201ENSMUST00000204562 337 ntBASIC6.28□□□□□ -1.4
Col1a1P11087 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC6.28□□□□□ -1.4
Col1a1P11087 Gm24763-201ENSMUST00000083688 190 ntBASIC6.28□□□□□ -1.4
Col1a1P11087 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col1a1P11087 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col1a1P11087 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col1a1P11087 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col1a1P11087 AC151734.1-201ENSMUST00000227023 1740 ntBASIC6.28□□□□□ -1.4
Col1a1P11087 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC6.28□□□□□ -1.4
Col1a1P11087 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col1a1P11087 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col1a1P11087 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col1a1P11087 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col1a1P11087 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col1a1P11087 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.28□□□□□ -1.4
Col1a1P11087 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col1a1P11087 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.28□□□□□ -1.4
Col1a1P11087 Gm7416-201ENSMUST00000117448 1487 ntBASIC6.28□□□□□ -1.4
Col1a1P11087 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col1a1P11087 Mir546-201ENSMUST00000102105 121 ntBASIC6.28□□□□□ -1.4
Col1a1P11087 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col1a1P11087 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC6.28□□□□□ -1.4
Col1a1P11087 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col1a1P11087 Gm37973-201ENSMUST00000195767 1289 ntBASIC6.28□□□□□ -1.4
Col1a1P11087 BX530055.1-201ENSMUST00000197285 122 ntBASIC6.28□□□□□ -1.4
Col1a1P11087 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC6.28□□□□□ -1.4
Col1a1P11087 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col1a1P11087 Gm9512-201ENSMUST00000223112 497 ntBASIC6.28□□□□□ -1.4
Col1a1P11087 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col1a1P11087 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Col1a1P11087 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col1a1P11087 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
Col1a1P11087 Malat1-201ENSMUST00000172812 6983 ntBASIC6.27□□□□□ -1.4
Col1a1P11087 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col1a1P11087 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col1a1P11087 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col1a1P11087 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col1a1P11087 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col1a1P11087 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col1a1P11087 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col1a1P11087 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms