Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxd3P09027 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxd3P09027 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxd3P09027 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxd3P09027 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxd3P09027 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxd3P09027 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxd3P09027 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Mir503-201ENSMUST00000102168 71 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm24338-201ENSMUST00000104205 127 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm11898-201ENSMUST00000117161 385 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm13463-201ENSMUST00000119020 233 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm14106-201ENSMUST00000119382 438 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm13717-201ENSMUST00000119868 365 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm12593-201ENSMUST00000120981 743 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm11609-201ENSMUST00000121926 793 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm23118-201ENSMUST00000122657 187 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm15900-201ENSMUST00000161584 342 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm6673-201ENSMUST00000166114 700 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm9286-201ENSMUST00000173586 508 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm26746-201ENSMUST00000181722 487 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm28390-201ENSMUST00000185212 700 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm26413-201ENSMUST00000196783 126 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm44870-201ENSMUST00000207291 357 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm45742-201ENSMUST00000212400 433 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 AC139638.1-201ENSMUST00000218027 364 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC5.79□□□□□ -1.48
Hoxd3P09027 CT009713.5-201ENSMUST00000224508 909 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxd3P09027 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm5514-201ENSMUST00000060477 306 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxd3P09027 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxd3P09027 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxd3P09027 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxd3P09027 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxd3P09027 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxd3P09027 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC5.79□□□□□ -1.48
Hoxd3P09027 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxd3P09027 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
Hoxd3P09027 AC102369.2-201ENSMUST00000219725 1679 ntBASIC5.79□□□□□ -1.48
Hoxd3P09027 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm43196-201ENSMUST00000201762 2114 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Hoxd3P09027 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm43886-201ENSMUST00000205039 2386 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm37496-201ENSMUST00000191930 2509 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm29113-201ENSMUST00000185991 3432 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm22021-201ENSMUST00000104353 107 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm11517-201ENSMUST00000119491 387 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm13804-201ENSMUST00000119552 172 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm14980-201ENSMUST00000121247 736 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm24139-201ENSMUST00000122780 288 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm24422-201ENSMUST00000157800 119 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm23007-201ENSMUST00000158951 177 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm15838-201ENSMUST00000161575 180 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.78□□□□□ -1.48
Hoxd3P09027 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms