Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Gm29452-201ENSMUST00000187996 313 ntBASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Gm28860-201ENSMUST00000188103 313 ntBASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 AC154467.1-201ENSMUST00000227527 449 ntBASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Phf21a-204ENSMUST00000111290 6332 ntTSL 5 BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Phf21a-203ENSMUST00000090586 6310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Slc39a9-201ENSMUST00000085245 5201 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Gm23673-201ENSMUST00000157474 298 ntBASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Gm27805-201ENSMUST00000184513 79 ntBASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Gm17847-201ENSMUST00000188261 1127 ntBASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Gm38150-201ENSMUST00000192996 452 ntBASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Gm23464-201ENSMUST00000083145 147 ntBASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Pogz-205ENSMUST00000107270 6399 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 AC120347.1-201ENSMUST00000223326 1639 ntBASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Gm23554-201ENSMUST00000157818 110 ntBASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Gm24359-201ENSMUST00000158418 221 ntBASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Ang-ps2-201ENSMUST00000178173 433 ntBASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Gm36382-201ENSMUST00000198892 541 ntBASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Gm29793-201ENSMUST00000202874 460 ntBASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Gm45344-201ENSMUST00000211610 341 ntBASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a3E9PWQ3 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Gm15988-201ENSMUST00000118677 367 ntBASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Gm12340-201ENSMUST00000121617 462 ntBASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Gm10042-201ENSMUST00000079884 78 ntBASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Gm8215-201ENSMUST00000120627 990 ntBASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Gm25291-201ENSMUST00000122795 144 ntBASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Gm37336-202ENSMUST00000193705 468 ntBASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Gm7034-201ENSMUST00000218638 645 ntBASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 AC123534.1-201ENSMUST00000224060 656 ntBASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a3E9PWQ3 Prdm16-204ENSMUST00000105636 8426 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms