Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim9Q8C7M3 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.21□□□□□ -1.42
Trim9Q8C7M3 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim9Q8C7M3 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.21□□□□□ -1.42
Trim9Q8C7M3 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim9Q8C7M3 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim9Q8C7M3 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Trim9Q8C7M3 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.21□□□□□ -1.42
Trim9Q8C7M3 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim9Q8C7M3 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim9Q8C7M3 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim9Q8C7M3 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim9Q8C7M3 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim9Q8C7M3 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim9Q8C7M3 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim9Q8C7M3 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim9Q8C7M3 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Trim9Q8C7M3 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm42662-201ENSMUST00000202539 1431 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Mir290a-201ENSMUST00000104627 83 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm14943-201ENSMUST00000118056 546 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm6175-201ENSMUST00000121351 400 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm11350-201ENSMUST00000121436 870 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm22160-201ENSMUST00000158405 328 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Mir6374-201ENSMUST00000184003 107 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm18800-202ENSMUST00000188688 1105 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm38214-201ENSMUST00000192581 988 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm37235-201ENSMUST00000195171 59 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm37993-201ENSMUST00000195301 988 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm43973-201ENSMUST00000203562 210 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm45485-201ENSMUST00000211229 357 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 AC121947.1-201ENSMUST00000221755 1145 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 AC154851.2-201ENSMUST00000222172 644 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Platr25-208ENSMUST00000222602 939 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm3563-201ENSMUST00000172963 1628 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trim9Q8C7M3 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trim9Q8C7M3 AC116726.1-201ENSMUST00000215028 3497 ntBASIC6.19□□□□□ -1.42
Trim9Q8C7M3 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim9Q8C7M3 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Gm14388-201ENSMUST00000118119 477 ntBASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Gm11533-201ENSMUST00000120287 477 ntBASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Gm14620-201ENSMUST00000120656 383 ntBASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Gm15044-201ENSMUST00000120703 598 ntBASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trim9Q8C7M3 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim9Q8C7M3 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC6.19□□□□□ -1.42
Trim9Q8C7M3 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Gm27210-201ENSMUST00000184263 402 ntBASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Gm27148-201ENSMUST00000185086 160 ntBASIC6.19□□□□□ -1.42
Trim9Q8C7M3 Gm18553-201ENSMUST00000194152 634 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms