Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Gm14874-201ENSMUST00000118995 438 ntBASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Gm25278-201ENSMUST00000157267 120 ntBASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Gm16589-201ENSMUST00000159522 918 ntBASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Ear-ps9-201ENSMUST00000161963 460 ntBASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Gm3531-201ENSMUST00000162698 489 ntBASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 AC124420.1-201ENSMUST00000219779 791 ntBASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Gm6863-201ENSMUST00000052882 636 ntBASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Gm38118-201ENSMUST00000192052 2222 ntBASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.64
Col6a6Q8C6K9 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm16082-201ENSMUST00000115992 377 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm15400-201ENSMUST00000118944 601 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm3362-201ENSMUST00000148102 466 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm5372-201ENSMUST00000187540 409 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm8264-201ENSMUST00000217801 465 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm8158-201ENSMUST00000219220 465 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm8112-201ENSMUST00000219637 465 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm20287-201ENSMUST00000172848 2367 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm23274-201ENSMUST00000104056 130 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Mir3104-201ENSMUST00000174911 63 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 V1rg10-201ENSMUST00000183378 937 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Mir6899-201ENSMUST00000184798 64 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm28503-201ENSMUST00000185966 147 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm2367-201ENSMUST00000192374 472 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Mir409-201ENSMUST00000198153 79 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm43629-201ENSMUST00000201782 704 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm44281-201ENSMUST00000203090 166 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm45228-201ENSMUST00000206585 352 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 AC129219.1-201ENSMUST00000224336 448 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 Gm10115-201ENSMUST00000076071 1228 ntBASIC4.83□□□□□ -1.64
Col6a6Q8C6K9 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Gm43750-201ENSMUST00000199027 2493 ntBASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Xpo7-203ENSMUST00000226448 3663 ntBASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Gm44735-201ENSMUST00000206197 1752 ntBASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Gm4011-201ENSMUST00000174657 2555 ntBASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 Gm6818-201ENSMUST00000190556 2558 ntBASIC4.82□□□□□ -1.64
Col6a6Q8C6K9 AC153729.1-201ENSMUST00000214055 2562 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms