Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm44279-201ENSMUST00000205154 472 ntBASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm18644-201ENSMUST00000211458 815 ntBASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm8613-201ENSMUST00000220383 1077 ntBASIC7.57□□□□□ -1.2
Trim47Q8C0E3 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 AC154806.5-205ENSMUST00000228828 411 ntBASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Mir181a-2-201ENSMUST00000083489 76 ntBASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm24254-201ENSMUST00000083702 104 ntBASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 AC163660.3-201ENSMUST00000224253 1563 ntBASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm37595-201ENSMUST00000192668 1742 ntBASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm43990-201ENSMUST00000203790 1691 ntBASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm44750-201ENSMUST00000206185 2223 ntBASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC7.56□□□□□ -1.2
Trim47Q8C0E3 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm13439-201ENSMUST00000117541 409 ntBASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm14897-201ENSMUST00000118213 207 ntBASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm13930-201ENSMUST00000118569 368 ntBASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm14821-201ENSMUST00000121975 435 ntBASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm26256-201ENSMUST00000122499 186 ntBASIC7.56□□□□□ -1.2
Trim47Q8C0E3 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm22336-201ENSMUST00000157719 107 ntBASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm22534-201ENSMUST00000158173 104 ntBASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm23141-201ENSMUST00000178682 94 ntBASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Mir6989-201ENSMUST00000184812 65 ntBASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm44111-201ENSMUST00000204649 399 ntBASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 AC154558.1-201ENSMUST00000222278 415 ntBASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm24621-201ENSMUST00000082679 140 ntBASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm44255-201ENSMUST00000203456 2053 ntBASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Trim47Q8C0E3 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 AC129308.2-203ENSMUST00000224109 2385 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 AC159002.2-201ENSMUST00000228843 4874 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm3883-201ENSMUST00000098119 3229 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm24473-201ENSMUST00000104483 131 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Snord88a-201ENSMUST00000116723 90 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms