Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm23795-201ENSMUST00000084006 137 ntBASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Ccdc40Q8BI79 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Gm13866-201ENSMUST00000118901 968 ntBASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Gm12850-201ENSMUST00000119210 436 ntBASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Gm13924-201ENSMUST00000119899 486 ntBASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Gm16423-201ENSMUST00000120078 947 ntBASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Mir6952-201ENSMUST00000185092 61 ntBASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Gm37996-201ENSMUST00000191859 367 ntBASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Gm45870-201ENSMUST00000211269 601 ntBASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 AC211878.6-201ENSMUST00000221896 358 ntBASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Cma2-202ENSMUST00000228263 857 ntBASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Gm22126-201ENSMUST00000083244 142 ntBASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc40Q8BI79 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Gm6427-201ENSMUST00000118721 979 ntBASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Gm5405-201ENSMUST00000120478 609 ntBASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Gm24692-201ENSMUST00000157761 146 ntBASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Gm23408-201ENSMUST00000158523 265 ntBASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Gm22923-201ENSMUST00000174952 110 ntBASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Gm27219-201ENSMUST00000184633 742 ntBASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Gm28660-201ENSMUST00000186496 253 ntBASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Gm28967-201ENSMUST00000187351 281 ntBASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Gm6693-201ENSMUST00000189583 813 ntBASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Gm6074-201ENSMUST00000193340 451 ntBASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Gm412-201ENSMUST00000193360 948 ntBASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Gm31861-201ENSMUST00000204563 672 ntBASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Gm19900-201ENSMUST00000207285 576 ntBASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc40Q8BI79 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms