Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.2□□□□□ -1.42
Scaf4Q6PFF0 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scaf4Q6PFF0 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scaf4Q6PFF0 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
Scaf4Q6PFF0 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.2□□□□□ -1.42
Scaf4Q6PFF0 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scaf4Q6PFF0 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.2□□□□□ -1.42
Scaf4Q6PFF0 Gm37056-201ENSMUST00000192141 1865 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm18422-202ENSMUST00000203798 2214 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm13928-201ENSMUST00000120326 1732 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm24284-201ENSMUST00000104240 142 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm12814-201ENSMUST00000117091 846 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm12131-201ENSMUST00000117479 359 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm11504-201ENSMUST00000120211 173 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm12006-201ENSMUST00000120786 403 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm14982-201ENSMUST00000121102 442 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm13024-201ENSMUST00000121756 718 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm23505-201ENSMUST00000158989 130 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm3242-201ENSMUST00000171273 485 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm27942-201ENSMUST00000184669 101 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm5692-201ENSMUST00000187254 1057 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm18447-201ENSMUST00000187501 307 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm28507-201ENSMUST00000189737 703 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm37946-201ENSMUST00000192064 347 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm44300-201ENSMUST00000196792 121 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm32158-201ENSMUST00000200135 404 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm43472-201ENSMUST00000200175 154 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm44003-201ENSMUST00000203024 490 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm43979-201ENSMUST00000203179 475 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm44023-201ENSMUST00000203710 469 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm17984-201ENSMUST00000205286 859 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 AC091260.1-201ENSMUST00000216112 229 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 AC116502.1-201ENSMUST00000220989 291 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm9321-201ENSMUST00000221179 778 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm6436-201ENSMUST00000077163 451 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm10221-201ENSMUST00000088299 309 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm45179-201ENSMUST00000208452 4337 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scaf4Q6PFF0 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scaf4Q6PFF0 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scaf4Q6PFF0 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scaf4Q6PFF0 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Scaf4Q6PFF0 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms