Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NipblQ6KCD5 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NipblQ6KCD5 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
NipblQ6KCD5 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC4.21□□□□□ -1.74
NipblQ6KCD5 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.21□□□□□ -1.74
NipblQ6KCD5 Gm13808-201ENSMUST00000121353 184 ntBASIC4.21□□□□□ -1.74
NipblQ6KCD5 Gm13232-201ENSMUST00000121816 632 ntBASIC4.21□□□□□ -1.74
NipblQ6KCD5 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NipblQ6KCD5 Mir1945-201ENSMUST00000157919 78 ntBASIC4.21□□□□□ -1.74
NipblQ6KCD5 Ighv3-2-201ENSMUST00000191842 349 ntBASIC4.21□□□□□ -1.74
NipblQ6KCD5 Gm18553-201ENSMUST00000194152 634 ntBASIC4.21□□□□□ -1.74
NipblQ6KCD5 Gm37167-201ENSMUST00000194946 396 ntBASIC4.21□□□□□ -1.74
NipblQ6KCD5 AC154450.1-201ENSMUST00000220911 485 ntBASIC4.21□□□□□ -1.74
NipblQ6KCD5 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NipblQ6KCD5 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
NipblQ6KCD5 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NipblQ6KCD5 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
NipblQ6KCD5 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC4.21□□□□□ -1.74
NipblQ6KCD5 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NipblQ6KCD5 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NipblQ6KCD5 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC4.21□□□□□ -1.74
NipblQ6KCD5 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NipblQ6KCD5 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NipblQ6KCD5 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NipblQ6KCD5 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.21□□□□□ -1.74
NipblQ6KCD5 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NipblQ6KCD5 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NipblQ6KCD5 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
NipblQ6KCD5 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NipblQ6KCD5 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NipblQ6KCD5 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gm12633-201ENSMUST00000117742 1705 ntBASIC4.2□□□□□ -1.74
NipblQ6KCD5 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.2□□□□□ -1.74
NipblQ6KCD5 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gm15152-201ENSMUST00000121540 394 ntBASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NipblQ6KCD5 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gm9006-201ENSMUST00000165520 841 ntBASIC4.2□□□□□ -1.74
NipblQ6KCD5 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gm6155-201ENSMUST00000173735 341 ntBASIC4.2□□□□□ -1.74
NipblQ6KCD5 Mir7685-201ENSMUST00000183555 62 ntBASIC4.2□□□□□ -1.74
NipblQ6KCD5 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gm29474-201ENSMUST00000187688 379 ntBASIC4.2□□□□□ -1.74
NipblQ6KCD5 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.2□□□□□ -1.74
NipblQ6KCD5 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.2□□□□□ -1.74
NipblQ6KCD5 Mir194-1-201ENSMUST00000083647 67 ntBASIC4.2□□□□□ -1.74
NipblQ6KCD5 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gm16254-201ENSMUST00000131528 730 ntBASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gm23168-201ENSMUST00000157156 143 ntBASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NipblQ6KCD5 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gm37495-201ENSMUST00000194590 264 ntBASIC4.2□□□□□ -1.74
NipblQ6KCD5 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gm44824-201ENSMUST00000207021 229 ntBASIC4.2□□□□□ -1.74
NipblQ6KCD5 AC153961.1-201ENSMUST00000217760 385 ntBASIC4.2□□□□□ -1.74
NipblQ6KCD5 AC102291.1-201ENSMUST00000227164 529 ntBASIC4.2□□□□□ -1.74
NipblQ6KCD5 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.2□□□□□ -1.74
NipblQ6KCD5 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NipblQ6KCD5 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gm15950-201ENSMUST00000162902 1973 ntBASIC4.2□□□□□ -1.74
NipblQ6KCD5 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
NipblQ6KCD5 Gm6175-201ENSMUST00000121351 400 ntBASIC4.19□□□□□ -1.74
NipblQ6KCD5 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC4.19□□□□□ -1.74
NipblQ6KCD5 Mir713-201ENSMUST00000178651 108 ntBASIC4.19□□□□□ -1.74
NipblQ6KCD5 Gm27189-201ENSMUST00000184119 190 ntBASIC4.19□□□□□ -1.74
NipblQ6KCD5 Gm37878-201ENSMUST00000192108 387 ntBASIC4.19□□□□□ -1.74
NipblQ6KCD5 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC4.19□□□□□ -1.74
NipblQ6KCD5 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.19□□□□□ -1.74
NipblQ6KCD5 Gm8719-201ENSMUST00000203602 534 ntBASIC4.19□□□□□ -1.74
NipblQ6KCD5 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC4.19□□□□□ -1.74
NipblQ6KCD5 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms