Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm24938-201ENSMUST00000102225 110 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm22271-201ENSMUST00000104035 128 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm24334-201ENSMUST00000104210 128 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm14513-201ENSMUST00000117403 123 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm12040-201ENSMUST00000118357 537 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm9434-201ENSMUST00000118975 813 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm17061-201ENSMUST00000163167 499 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim63Q38HM4 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm26509-201ENSMUST00000180947 948 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm28801-201ENSMUST00000188761 449 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm29524-201ENSMUST00000190819 699 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm29416-202ENSMUST00000191328 1201 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm8010-201ENSMUST00000194128 873 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm6321-201ENSMUST00000194460 1090 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm6543-201ENSMUST00000197353 808 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Klra13-ps-203ENSMUST00000204367 850 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm2996-201ENSMUST00000211398 537 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm3333-202ENSMUST00000221763 1044 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 AC114008.1-201ENSMUST00000226193 937 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 AC129537.1-202ENSMUST00000226619 430 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim63Q38HM4 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim63Q38HM4 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.07□□□□□ -1.6
Trim63Q38HM4 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim63Q38HM4 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm23192-201ENSMUST00000102434 96 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm22934-201ENSMUST00000103961 132 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm22022-201ENSMUST00000104355 127 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Mir292-201ENSMUST00000104847 82 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Defa-ps7-201ENSMUST00000117139 168 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm12229-201ENSMUST00000120487 468 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm14979-201ENSMUST00000121561 1035 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm16407-201ENSMUST00000122134 567 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm23115-201ENSMUST00000158480 108 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim63Q38HM4 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Mir5106-201ENSMUST00000174936 73 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm26365-201ENSMUST00000179177 94 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm18848-201ENSMUST00000182069 792 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm26977-201ENSMUST00000183151 996 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm27942-201ENSMUST00000184669 101 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm21654-201ENSMUST00000188086 691 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm28625-201ENSMUST00000188309 205 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm28164-201ENSMUST00000190143 442 ntBASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC5.06□□□□□ -1.6
Trim63Q38HM4 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC5.06□□□□□ -1.6
Trim63Q38HM4 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim63Q38HM4 Gm44306-201ENSMUST00000203058 203 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms