Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm16254-201ENSMUST00000131528 730 ntBASIC5.95□□□□□ -1.46
NcanP55066 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.95□□□□□ -1.46
NcanP55066 Gm8988-201ENSMUST00000155015 1240 ntBASIC5.95□□□□□ -1.46
NcanP55066 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NcanP55066 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
NcanP55066 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NcanP55066 Gm22411-201ENSMUST00000175462 126 ntBASIC5.95□□□□□ -1.46
NcanP55066 Gm22002-201ENSMUST00000175622 125 ntBASIC5.95□□□□□ -1.46
NcanP55066 Gm29332-201ENSMUST00000190829 227 ntBASIC5.95□□□□□ -1.46
NcanP55066 Gm29138-201ENSMUST00000191444 348 ntBASIC5.95□□□□□ -1.46
NcanP55066 Gm18427-201ENSMUST00000195422 515 ntBASIC5.95□□□□□ -1.46
NcanP55066 Gm31306-201ENSMUST00000197517 508 ntBASIC5.95□□□□□ -1.46
NcanP55066 Gm43031-201ENSMUST00000198500 1887 ntBASIC5.95□□□□□ -1.46
NcanP55066 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NcanP55066 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NcanP55066 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NcanP55066 Gm44776-201ENSMUST00000207212 381 ntBASIC5.95□□□□□ -1.46
NcanP55066 Gm6702-201ENSMUST00000208496 471 ntBASIC5.95□□□□□ -1.46
NcanP55066 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC5.95□□□□□ -1.46
NcanP55066 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.95□□□□□ -1.46
NcanP55066 CT030184.2-201ENSMUST00000223064 263 ntBASIC5.95□□□□□ -1.46
NcanP55066 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NcanP55066 AC136376.1-201ENSMUST00000228496 950 ntBASIC5.95□□□□□ -1.46
NcanP55066 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.95□□□□□ -1.46
NcanP55066 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.95□□□□□ -1.46
NcanP55066 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
NcanP55066 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NcanP55066 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NcanP55066 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NcanP55066 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NcanP55066 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.95□□□□□ -1.46
NcanP55066 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
NcanP55066 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC5.95□□□□□ -1.46
NcanP55066 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NcanP55066 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NcanP55066 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
NcanP55066 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC5.95□□□□□ -1.46
NcanP55066 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NcanP55066 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
NcanP55066 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NcanP55066 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC5.94□□□□□ -1.46
NcanP55066 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC5.94□□□□□ -1.46
NcanP55066 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.94□□□□□ -1.46
NcanP55066 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NcanP55066 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.94□□□□□ -1.46
NcanP55066 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.94□□□□□ -1.46
NcanP55066 Gm6461-201ENSMUST00000120015 633 ntBASIC5.94□□□□□ -1.46
NcanP55066 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NcanP55066 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.94□□□□□ -1.46
NcanP55066 Scarna13-201ENSMUST00000158164 275 ntBASIC5.94□□□□□ -1.46
NcanP55066 Gm8458-201ENSMUST00000196658 819 ntBASIC5.94□□□□□ -1.46
NcanP55066 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NcanP55066 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NcanP55066 Gm9038-201ENSMUST00000203400 604 ntBASIC5.94□□□□□ -1.46
NcanP55066 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NcanP55066 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.94□□□□□ -1.46
NcanP55066 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NcanP55066 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.94□□□□□ -1.46
NcanP55066 AC154450.1-201ENSMUST00000220911 485 ntBASIC5.94□□□□□ -1.46
NcanP55066 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NcanP55066 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NcanP55066 Gm22741-201ENSMUST00000083438 165 ntBASIC5.94□□□□□ -1.46
NcanP55066 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NcanP55066 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NcanP55066 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NcanP55066 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.94□□□□□ -1.46
NcanP55066 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.94□□□□□ -1.46
NcanP55066 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NcanP55066 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
NcanP55066 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
NcanP55066 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NcanP55066 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NcanP55066 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NcanP55066 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NcanP55066 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.93□□□□□ -1.46
NcanP55066 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
NcanP55066 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NcanP55066 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC5.93□□□□□ -1.46
NcanP55066 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC5.93□□□□□ -1.46
NcanP55066 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.93□□□□□ -1.46
NcanP55066 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NcanP55066 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NcanP55066 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.93□□□□□ -1.46
NcanP55066 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NcanP55066 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NcanP55066 Gm22650-201ENSMUST00000175138 105 ntBASIC5.93□□□□□ -1.46
NcanP55066 Gm18558-201ENSMUST00000186253 1214 ntBASIC5.93□□□□□ -1.46
NcanP55066 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NcanP55066 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NcanP55066 Gm43779-201ENSMUST00000196691 829 ntBASIC5.93□□□□□ -1.46
NcanP55066 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.93□□□□□ -1.46
NcanP55066 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.93□□□□□ -1.46
NcanP55066 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
NcanP55066 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
NcanP55066 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NcanP55066 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NcanP55066 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NcanP55066 Gm25139-201ENSMUST00000083247 210 ntBASIC5.93□□□□□ -1.46
NcanP55066 Mir323-201ENSMUST00000083683 86 ntBASIC5.93□□□□□ -1.46
NcanP55066 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 122.1 ms