Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.94□□□□□ -1.3
Msh6P54276 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC6.94□□□□□ -1.3
Msh6P54276 Gm38189-201ENSMUST00000194495 1457 ntBASIC6.94□□□□□ -1.3
Msh6P54276 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Msh6P54276 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.94□□□□□ -1.3
Msh6P54276 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Msh6P54276 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.94□□□□□ -1.3
Msh6P54276 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.94□□□□□ -1.3
Msh6P54276 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Msh6P54276 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Msh6P54276 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Msh6P54276 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Msh6P54276 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC6.94□□□□□ -1.3
Msh6P54276 Gm11447-201ENSMUST00000118983 858 ntBASIC6.94□□□□□ -1.3
Msh6P54276 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC6.94□□□□□ -1.3
Msh6P54276 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Msh6P54276 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Msh6P54276 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Msh6P54276 Gm34176-201ENSMUST00000192621 474 ntBASIC6.94□□□□□ -1.3
Msh6P54276 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC6.94□□□□□ -1.3
Msh6P54276 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Msh6P54276 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Msh6P54276 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC6.94□□□□□ -1.3
Msh6P54276 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC6.94□□□□□ -1.3
Msh6P54276 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC6.94□□□□□ -1.3
Msh6P54276 AC131745.1-201ENSMUST00000223660 330 ntBASIC6.94□□□□□ -1.3
Msh6P54276 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Msh6P54276 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.93□□□□□ -1.3
Msh6P54276 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Msh6P54276 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.93□□□□□ -1.3
Msh6P54276 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.93□□□□□ -1.3
Msh6P54276 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Msh6P54276 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.93□□□□□ -1.3
Msh6P54276 AC130827.1-201ENSMUST00000220476 3850 ntBASIC6.93□□□□□ -1.3
Msh6P54276 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Msh6P54276 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Msh6P54276 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Msh6P54276 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Msh6P54276 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Msh6P54276 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.93□□□□□ -1.3
Msh6P54276 Gm12641-201ENSMUST00000117874 985 ntBASIC6.93□□□□□ -1.3
Msh6P54276 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Msh6P54276 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Msh6P54276 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC6.93□□□□□ -1.3
Msh6P54276 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC6.93□□□□□ -1.3
Msh6P54276 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC6.93□□□□□ -1.3
Msh6P54276 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Msh6P54276 Gm25271-201ENSMUST00000157273 290 ntBASIC6.93□□□□□ -1.3
Msh6P54276 Gm20523-201ENSMUST00000174340 1124 ntBASIC6.93□□□□□ -1.3
Msh6P54276 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Msh6P54276 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Msh6P54276 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Msh6P54276 Gm6223-201ENSMUST00000178436 871 ntBASIC6.93□□□□□ -1.3
Msh6P54276 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Msh6P54276 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Msh6P54276 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Msh6P54276 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Msh6P54276 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Msh6P54276 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
Msh6P54276 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Msh6P54276 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Msh6P54276 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC6.93□□□□□ -1.3
Msh6P54276 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC6.93□□□□□ -1.3
Msh6P54276 Mir6516-201ENSMUST00000196236 110 ntBASIC6.93□□□□□ -1.3
Msh6P54276 Gm43524-201ENSMUST00000197278 298 ntBASIC6.93□□□□□ -1.3
Msh6P54276 Gm18127-201ENSMUST00000208479 725 ntBASIC6.93□□□□□ -1.3
Msh6P54276 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC6.93□□□□□ -1.3
Msh6P54276 AC165953.1-201ENSMUST00000226386 357 ntBASIC6.93□□□□□ -1.3
Msh6P54276 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Msh6P54276 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Msh6P54276 Snord15b-201ENSMUST00000083032 145 ntBASIC6.93□□□□□ -1.3
Msh6P54276 Gm22741-201ENSMUST00000083438 165 ntBASIC6.93□□□□□ -1.3
Msh6P54276 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Msh6P54276 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Msh6P54276 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Msh6P54276 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Msh6P54276 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Msh6P54276 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.92□□□□□ -1.3
Msh6P54276 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
Msh6P54276 Gm44235-201ENSMUST00000204312 3058 ntBASIC6.92□□□□□ -1.3
Msh6P54276 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.92□□□□□ -1.3
Msh6P54276 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
Msh6P54276 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Msh6P54276 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Msh6P54276 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Msh6P54276 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Msh6P54276 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.92□□□□□ -1.3
Msh6P54276 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Msh6P54276 Gm26376-201ENSMUST00000104784 110 ntBASIC6.92□□□□□ -1.3
Msh6P54276 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC6.92□□□□□ -1.3
Msh6P54276 Scarna13-201ENSMUST00000158164 275 ntBASIC6.92□□□□□ -1.3
Msh6P54276 Gm23700-201ENSMUST00000158842 102 ntBASIC6.92□□□□□ -1.3
Msh6P54276 Gm15790-201ENSMUST00000161109 1251 ntBASIC6.92□□□□□ -1.3
Msh6P54276 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Msh6P54276 Gm8941-201ENSMUST00000181451 899 ntBASIC6.92□□□□□ -1.3
Msh6P54276 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Msh6P54276 Igkv2-107-201ENSMUST00000196000 313 ntBASIC6.92□□□□□ -1.3
Msh6P54276 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
Msh6P54276 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6.92□□□□□ -1.3
Msh6P54276 CT030124.1-201ENSMUST00000217130 235 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms