Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm15490-201ENSMUST00000119894 387 ntBASIC5.31□□□□□ -1.56
Sox3P53784 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.31□□□□□ -1.56
Sox3P53784 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC5.31□□□□□ -1.56
Sox3P53784 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.31□□□□□ -1.56
Sox3P53784 Gm22726-201ENSMUST00000158089 179 ntBASIC5.31□□□□□ -1.56
Sox3P53784 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC5.31□□□□□ -1.56
Sox3P53784 Gm44370-201ENSMUST00000175436 112 ntBASIC5.31□□□□□ -1.56
Sox3P53784 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.31□□□□□ -1.56
Sox3P53784 Vis1-201ENSMUST00000183957 201 ntBASIC5.31□□□□□ -1.56
Sox3P53784 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC5.31□□□□□ -1.56
Sox3P53784 Gm18427-201ENSMUST00000195422 515 ntBASIC5.31□□□□□ -1.56
Sox3P53784 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.31□□□□□ -1.56
Sox3P53784 Gm44259-201ENSMUST00000204996 298 ntBASIC5.31□□□□□ -1.56
Sox3P53784 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.31□□□□□ -1.56
Sox3P53784 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Sox3P53784 Gm45276-201ENSMUST00000209549 1086 ntBASIC5.31□□□□□ -1.56
Sox3P53784 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.31□□□□□ -1.56
Sox3P53784 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC5.31□□□□□ -1.56
Sox3P53784 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Sox3P53784 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Sox3P53784 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox3P53784 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox3P53784 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Sox3P53784 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Sox3P53784 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.31□□□□□ -1.56
Sox3P53784 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox3P53784 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.31□□□□□ -1.56
Sox3P53784 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.31□□□□□ -1.56
Sox3P53784 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox3P53784 AW046200-203ENSMUST00000211787 2479 ntBASIC5.31□□□□□ -1.56
Sox3P53784 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.31□□□□□ -1.56
Sox3P53784 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Sox3P53784 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC5.31□□□□□ -1.56
Sox3P53784 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.31□□□□□ -1.56
Sox3P53784 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox3P53784 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sox3P53784 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox3P53784 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.3□□□□□ -1.56
Sox3P53784 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.3□□□□□ -1.56
Sox3P53784 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Sox3P53784 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox3P53784 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox3P53784 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Sox3P53784 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
Sox3P53784 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Sox3P53784 Gm25422-201ENSMUST00000104219 129 ntBASIC5.3□□□□□ -1.56
Sox3P53784 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.3□□□□□ -1.56
Sox3P53784 Gm11908-201ENSMUST00000117755 347 ntBASIC5.3□□□□□ -1.56
Sox3P53784 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox3P53784 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.3□□□□□ -1.56
Sox3P53784 Gm13121-201ENSMUST00000120637 632 ntBASIC5.3□□□□□ -1.56
Sox3P53784 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sox3P53784 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sox3P53784 Gm20453-201ENSMUST00000173968 226 ntBASIC5.3□□□□□ -1.56
Sox3P53784 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sox3P53784 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sox3P53784 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
Sox3P53784 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sox3P53784 Gm17775-201ENSMUST00000198542 258 ntBASIC5.3□□□□□ -1.56
Sox3P53784 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox3P53784 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.3□□□□□ -1.56
Sox3P53784 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.3□□□□□ -1.56
Sox3P53784 Gm45246-201ENSMUST00000210820 367 ntBASIC5.3□□□□□ -1.56
Sox3P53784 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.3□□□□□ -1.56
Sox3P53784 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.3□□□□□ -1.56
Sox3P53784 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.3□□□□□ -1.56
Sox3P53784 CT030184.2-201ENSMUST00000223064 263 ntBASIC5.3□□□□□ -1.56
Sox3P53784 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.3□□□□□ -1.56
Sox3P53784 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox3P53784 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC5.3□□□□□ -1.56
Sox3P53784 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sox3P53784 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sox3P53784 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.3□□□□□ -1.56
Sox3P53784 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.3□□□□□ -1.56
Sox3P53784 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox3P53784 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sox3P53784 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sox3P53784 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox3P53784 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sox3P53784 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox3P53784 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sox3P53784 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sox3P53784 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sox3P53784 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.29□□□□□ -1.56
Sox3P53784 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sox3P53784 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Sox3P53784 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Sox3P53784 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.29□□□□□ -1.56
Sox3P53784 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Sox3P53784 Gm9314-201ENSMUST00000199881 1528 ntBASIC5.29□□□□□ -1.56
Sox3P53784 Gm45177-201ENSMUST00000209104 2307 ntBASIC5.29□□□□□ -1.56
Sox3P53784 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sox3P53784 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Sox3P53784 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.29□□□□□ -1.56
Sox3P53784 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.29□□□□□ -1.56
Sox3P53784 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sox3P53784 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sox3P53784 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Sox3P53784 Gm6134-201ENSMUST00000117265 171 ntBASIC5.29□□□□□ -1.56
Sox3P53784 Gm4989-201ENSMUST00000118711 749 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms