Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC7.54□□□□□ -1.2
Col18a1P39061 Gm14515-201ENSMUST00000121327 216 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 n-R5s174-201ENSMUST00000122638 121 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC7.54□□□□□ -1.2
Col18a1P39061 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Col18a1P39061 Gm15795-201ENSMUST00000160969 553 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col18a1P39061 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Col18a1P39061 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Col18a1P39061 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC7.54□□□□□ -1.2
Col18a1P39061 Gm18553-201ENSMUST00000194152 634 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC7.54□□□□□ -1.2
Col18a1P39061 Gm18985-201ENSMUST00000196472 1079 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 Gm19880-201ENSMUST00000207731 318 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 AC125543.1-201ENSMUST00000222778 101 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC7.54□□□□□ -1.2
Col18a1P39061 AC117656.3-205ENSMUST00000224606 1205 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Col18a1P39061 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Col18a1P39061 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Col18a1P39061 Gm10540-201ENSMUST00000097581 276 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col18a1P39061 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC7.54□□□□□ -1.2
Col18a1P39061 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Col18a1P39061 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Col18a1P39061 Gm43178-201ENSMUST00000197257 1386 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Col18a1P39061 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Col18a1P39061 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Col18a1P39061 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col18a1P39061 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Col18a1P39061 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Col18a1P39061 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col18a1P39061 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Col18a1P39061 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC7.54□□□□□ -1.2
Col18a1P39061 Gm16082-201ENSMUST00000115992 377 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 Gm14874-201ENSMUST00000118995 438 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 Gm14881-201ENSMUST00000120366 372 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 Gm23872-201ENSMUST00000175432 77 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col18a1P39061 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC7.54□□□□□ -1.2
Col18a1P39061 Gm9173-201ENSMUST00000198054 400 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Col18a1P39061 Gm43487-201ENSMUST00000200331 1031 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 Gm18268-201ENSMUST00000208445 943 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 AC153553.1-201ENSMUST00000218257 684 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 AC126275.1-201ENSMUST00000224881 446 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Col18a1P39061 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col18a1P39061 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col18a1P39061 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Col18a1P39061 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC7.53□□□□□ -1.2
Col18a1P39061 AC158982.1-205ENSMUST00000227339 1876 ntBASIC7.53□□□□□ -1.2
Col18a1P39061 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Col18a1P39061 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Col18a1P39061 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Col18a1P39061 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Col18a1P39061 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Col18a1P39061 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Col18a1P39061 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Col18a1P39061 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col18a1P39061 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col18a1P39061 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Col18a1P39061 Gm42528-201ENSMUST00000200697 3418 ntBASIC7.53□□□□□ -1.2
Col18a1P39061 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col18a1P39061 Gm37806-201ENSMUST00000194524 6387 ntBASIC7.53□□□□□ -1.2
Col18a1P39061 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col18a1P39061 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col18a1P39061 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC7.53□□□□□ -1.2
Col18a1P39061 Gm25418-201ENSMUST00000104214 129 ntBASIC7.53□□□□□ -1.2
Col18a1P39061 Gm22899-201ENSMUST00000104540 131 ntBASIC7.53□□□□□ -1.2
Col18a1P39061 Gm25848-201ENSMUST00000116790 144 ntBASIC7.53□□□□□ -1.2
Col18a1P39061 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Col18a1P39061 Gm15840-201ENSMUST00000122099 943 ntBASIC7.53□□□□□ -1.2
Col18a1P39061 Gm16589-201ENSMUST00000159522 918 ntBASIC7.53□□□□□ -1.2
Col18a1P39061 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col18a1P39061 Gm3531-201ENSMUST00000162698 489 ntBASIC7.53□□□□□ -1.2
Col18a1P39061 Mir7685-201ENSMUST00000183555 62 ntBASIC7.53□□□□□ -1.2
Col18a1P39061 Gm8498-201ENSMUST00000188227 974 ntBASIC7.53□□□□□ -1.2
Col18a1P39061 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col18a1P39061 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC7.53□□□□□ -1.2
Col18a1P39061 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col18a1P39061 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC7.53□□□□□ -1.2
Col18a1P39061 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC7.53□□□□□ -1.2
Col18a1P39061 AC154576.2-203ENSMUST00000224736 253 ntBASIC7.53□□□□□ -1.2
Col18a1P39061 CT025525.4-201ENSMUST00000227728 277 ntBASIC7.53□□□□□ -1.2
Col18a1P39061 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC7.53□□□□□ -1.2
Col18a1P39061 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Col18a1P39061 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col18a1P39061 Gm43130-201ENSMUST00000197721 3907 ntBASIC7.53□□□□□ -1.2
Col18a1P39061 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col18a1P39061 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Col18a1P39061 AC169038.1-201ENSMUST00000227378 1352 ntBASIC7.53□□□□□ -1.2
Col18a1P39061 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col18a1P39061 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col18a1P39061 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col18a1P39061 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms