Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Gm13679-201ENSMUST00000118678 484 ntBASIC5.6□□□□□ -1.51
PdgfbP31240 Gm14620-201ENSMUST00000120656 383 ntBASIC5.6□□□□□ -1.51
PdgfbP31240 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
PdgfbP31240 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC5.6□□□□□ -1.51
PdgfbP31240 Scarna13-201ENSMUST00000158164 275 ntBASIC5.6□□□□□ -1.51
PdgfbP31240 Gm7316-201ENSMUST00000165395 445 ntBASIC5.6□□□□□ -1.51
PdgfbP31240 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PdgfbP31240 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PdgfbP31240 Gm19029-201ENSMUST00000189923 564 ntBASIC5.6□□□□□ -1.51
PdgfbP31240 Gm29072-201ENSMUST00000191149 678 ntBASIC5.6□□□□□ -1.51
PdgfbP31240 Gm44776-201ENSMUST00000207212 381 ntBASIC5.6□□□□□ -1.51
PdgfbP31240 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.6□□□□□ -1.51
PdgfbP31240 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PdgfbP31240 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PdgfbP31240 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.6□□□□□ -1.51
PdgfbP31240 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.6□□□□□ -1.51
PdgfbP31240 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.6□□□□□ -1.51
PdgfbP31240 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PdgfbP31240 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PdgfbP31240 Gm25139-201ENSMUST00000083247 210 ntBASIC5.6□□□□□ -1.51
PdgfbP31240 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PdgfbP31240 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
PdgfbP31240 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PdgfbP31240 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PdgfbP31240 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PdgfbP31240 Gm28240-201ENSMUST00000187560 2053 ntBASIC5.6□□□□□ -1.51
PdgfbP31240 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PdgfbP31240 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PdgfbP31240 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
PdgfbP31240 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.6□□□□□ -1.51
PdgfbP31240 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.6□□□□□ -1.51
PdgfbP31240 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.6□□□□□ -1.51
PdgfbP31240 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PdgfbP31240 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PdgfbP31240 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PdgfbP31240 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PdgfbP31240 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PdgfbP31240 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PdgfbP31240 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PdgfbP31240 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.59□□□□□ -1.51
PdgfbP31240 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PdgfbP31240 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.59□□□□□ -1.51
PdgfbP31240 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.59□□□□□ -1.51
PdgfbP31240 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
PdgfbP31240 Gm12677-201ENSMUST00000118668 426 ntBASIC5.59□□□□□ -1.51
PdgfbP31240 Gm13213-201ENSMUST00000119668 474 ntBASIC5.59□□□□□ -1.51
PdgfbP31240 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PdgfbP31240 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.59□□□□□ -1.51
PdgfbP31240 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PdgfbP31240 Gm26486-201ENSMUST00000158021 110 ntBASIC5.59□□□□□ -1.51
PdgfbP31240 Gm25605-201ENSMUST00000158364 124 ntBASIC5.59□□□□□ -1.51
PdgfbP31240 Gm15812-201ENSMUST00000162331 748 ntBASIC5.59□□□□□ -1.51
PdgfbP31240 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.59□□□□□ -1.51
PdgfbP31240 V1rg10-201ENSMUST00000183378 937 ntBASIC5.59□□□□□ -1.51
PdgfbP31240 Gm27762-201ENSMUST00000183417 109 ntBASIC5.59□□□□□ -1.51
PdgfbP31240 Gm27286-201ENSMUST00000184934 179 ntBASIC5.59□□□□□ -1.51
PdgfbP31240 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.59□□□□□ -1.51
PdgfbP31240 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PdgfbP31240 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.59□□□□□ -1.51
PdgfbP31240 Gm18924-201ENSMUST00000211929 316 ntBASIC5.59□□□□□ -1.51
PdgfbP31240 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.59□□□□□ -1.51
PdgfbP31240 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.59□□□□□ -1.51
PdgfbP31240 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.59□□□□□ -1.51
PdgfbP31240 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PdgfbP31240 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PdgfbP31240 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PdgfbP31240 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PdgfbP31240 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PdgfbP31240 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PdgfbP31240 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PdgfbP31240 Olfr1143-201ENSMUST00000090708 945 ntBASIC5.59□□□□□ -1.51
PdgfbP31240 Gm37913-201ENSMUST00000192925 2544 ntBASIC5.59□□□□□ -1.51
PdgfbP31240 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PdgfbP31240 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PdgfbP31240 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PdgfbP31240 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.59□□□□□ -1.51
PdgfbP31240 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
PdgfbP31240 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PdgfbP31240 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.59□□□□□ -1.51
PdgfbP31240 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PdgfbP31240 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PdgfbP31240 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.59□□□□□ -1.52
PdgfbP31240 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PdgfbP31240 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PdgfbP31240 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PdgfbP31240 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PdgfbP31240 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
PdgfbP31240 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PdgfbP31240 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PdgfbP31240 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PdgfbP31240 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PdgfbP31240 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.58□□□□□ -1.52
PdgfbP31240 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
PdgfbP31240 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.58□□□□□ -1.52
PdgfbP31240 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PdgfbP31240 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.58□□□□□ -1.52
PdgfbP31240 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.58□□□□□ -1.52
PdgfbP31240 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PdgfbP31240 Gm22657-201ENSMUST00000104197 132 ntBASIC5.58□□□□□ -1.52
PdgfbP31240 Gm14874-201ENSMUST00000118995 438 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms