Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col1a1P11087 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col1a1P11087 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col1a1P11087 AC122382.2-201ENSMUST00000225128 3602 ntBASIC6.32□□□□□ -1.4
Col1a1P11087 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col1a1P11087 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col1a1P11087 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col1a1P11087 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col1a1P11087 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col1a1P11087 Gm24170-201ENSMUST00000104124 133 ntBASIC6.32□□□□□ -1.4
Col1a1P11087 Gm22657-201ENSMUST00000104197 132 ntBASIC6.32□□□□□ -1.4
Col1a1P11087 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col1a1P11087 Gm11278-201ENSMUST00000121002 997 ntBASIC6.32□□□□□ -1.4
Col1a1P11087 Gm11910-201ENSMUST00000121624 432 ntBASIC6.32□□□□□ -1.4
Col1a1P11087 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col1a1P11087 Gm6081-201ENSMUST00000134472 489 ntBASIC6.32□□□□□ -1.4
Col1a1P11087 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col1a1P11087 Gm15790-201ENSMUST00000161109 1251 ntBASIC6.32□□□□□ -1.4
Col1a1P11087 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Col1a1P11087 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC6.32□□□□□ -1.4
Col1a1P11087 Gm27875-201ENSMUST00000184425 123 ntBASIC6.32□□□□□ -1.4
Col1a1P11087 Gm37445-201ENSMUST00000195318 242 ntBASIC6.32□□□□□ -1.4
Col1a1P11087 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC6.32□□□□□ -1.4
Col1a1P11087 Gm43629-201ENSMUST00000201782 704 ntBASIC6.32□□□□□ -1.4
Col1a1P11087 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC6.32□□□□□ -1.4
Col1a1P11087 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col1a1P11087 Gm6906-201ENSMUST00000218014 569 ntBASIC6.32□□□□□ -1.4
Col1a1P11087 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.32□□□□□ -1.4
Col1a1P11087 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Col1a1P11087 Gm22350-201ENSMUST00000083924 156 ntBASIC6.32□□□□□ -1.4
Col1a1P11087 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Col1a1P11087 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col1a1P11087 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col1a1P11087 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Col1a1P11087 Gm42508-201ENSMUST00000199972 3292 ntBASIC6.32□□□□□ -1.4
Col1a1P11087 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col1a1P11087 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.32□□□□□ -1.4
Col1a1P11087 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
Col1a1P11087 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Col1a1P11087 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col1a1P11087 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Col1a1P11087 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col1a1P11087 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col1a1P11087 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col1a1P11087 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col1a1P11087 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col1a1P11087 Gm24469-201ENSMUST00000104487 131 ntBASIC6.31□□□□□ -1.4
Col1a1P11087 Gm12073-201ENSMUST00000117382 524 ntBASIC6.31□□□□□ -1.4
Col1a1P11087 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC6.31□□□□□ -1.4
Col1a1P11087 Gm24188-201ENSMUST00000157980 108 ntBASIC6.31□□□□□ -1.4
Col1a1P11087 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC6.31□□□□□ -1.4
Col1a1P11087 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col1a1P11087 Gm43018-201ENSMUST00000198075 1275 ntBASIC6.31□□□□□ -1.4
Col1a1P11087 Gm5288-201ENSMUST00000198323 1119 ntBASIC6.31□□□□□ -1.4
Col1a1P11087 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col1a1P11087 AC125539.2-202ENSMUST00000227983 587 ntBASIC6.31□□□□□ -1.4
Col1a1P11087 AC125539.2-201ENSMUST00000228339 753 ntBASIC6.31□□□□□ -1.4
Col1a1P11087 n-R5s88-201ENSMUST00000083173 118 ntBASIC6.31□□□□□ -1.4
Col1a1P11087 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col1a1P11087 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col1a1P11087 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Col1a1P11087 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.31□□□□□ -1.4
Col1a1P11087 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col1a1P11087 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col1a1P11087 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col1a1P11087 AC112972.2-201ENSMUST00000228702 2210 ntBASIC6.31□□□□□ -1.4
Col1a1P11087 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.31□□□□□ -1.4
Col1a1P11087 Gm44424-201ENSMUST00000203438 1826 ntBASIC6.3□□□□□ -1.4
Col1a1P11087 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col1a1P11087 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col1a1P11087 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col1a1P11087 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC6.3□□□□□ -1.4
Col1a1P11087 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Col1a1P11087 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col1a1P11087 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col1a1P11087 Gm3978-201ENSMUST00000163406 2512 ntBASIC6.3□□□□□ -1.4
Col1a1P11087 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col1a1P11087 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.3□□□□□ -1.4
Col1a1P11087 Gm11561-201ENSMUST00000117429 417 ntBASIC6.3□□□□□ -1.4
Col1a1P11087 Gm14046-201ENSMUST00000119389 509 ntBASIC6.3□□□□□ -1.4
Col1a1P11087 Gm17014-201ENSMUST00000120765 168 ntBASIC6.3□□□□□ -1.4
Col1a1P11087 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col1a1P11087 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC6.3□□□□□ -1.4
Col1a1P11087 Gm3362-201ENSMUST00000148102 466 ntBASIC6.3□□□□□ -1.4
Col1a1P11087 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC6.3□□□□□ -1.4
Col1a1P11087 Gm24217-201ENSMUST00000158260 133 ntBASIC6.3□□□□□ -1.4
Col1a1P11087 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col1a1P11087 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col1a1P11087 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col1a1P11087 Gm45156-201ENSMUST00000207255 439 ntBASIC6.3□□□□□ -1.4
Col1a1P11087 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC6.3□□□□□ -1.4
Col1a1P11087 Gm18329-201ENSMUST00000215832 589 ntBASIC6.3□□□□□ -1.4
Col1a1P11087 Gm8264-201ENSMUST00000217801 465 ntBASIC6.3□□□□□ -1.4
Col1a1P11087 Gm8158-201ENSMUST00000219220 465 ntBASIC6.3□□□□□ -1.4
Col1a1P11087 Gm8112-201ENSMUST00000219637 465 ntBASIC6.3□□□□□ -1.4
Col1a1P11087 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC6.3□□□□□ -1.4
Col1a1P11087 AC154840.1-201ENSMUST00000225216 408 ntBASIC6.3□□□□□ -1.4
Col1a1P11087 Olfr878-201ENSMUST00000086061 1065 ntBASIC6.3□□□□□ -1.4
Col1a1P11087 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col1a1P11087 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms