Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 CT009480.3-201ENSMUST00000224051 3032 ntBASIC9.88□□□□□ -0.83
Ccdc180J3QNE4 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 AC117769.3-201ENSMUST00000225814 1664 ntBASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Gm6223-201ENSMUST00000178436 871 ntBASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Gm6717-201ENSMUST00000185549 838 ntBASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 BX530055.1-201ENSMUST00000197285 122 ntBASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Gm42452-201ENSMUST00000199749 617 ntBASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Mir20a-201ENSMUST00000083508 107 ntBASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Gm26310-201ENSMUST00000157766 117 ntBASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Gm24186-201ENSMUST00000157983 127 ntBASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Gm22456-201ENSMUST00000082578 125 ntBASIC9.87□□□□□ -0.83
Ccdc180J3QNE4 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ccdc180J3QNE4 Gm10652-201ENSMUST00000199790 2622 ntBASIC9.86□□□□□ -0.83
Ccdc180J3QNE4 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccdc180J3QNE4 Gm37137-201ENSMUST00000195138 2684 ntBASIC9.86□□□□□ -0.83
Ccdc180J3QNE4 Gm7529-201ENSMUST00000213753 1897 ntBASIC9.86□□□□□ -0.83
Ccdc180J3QNE4 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ccdc180J3QNE4 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccdc180J3QNE4 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccdc180J3QNE4 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC9.86□□□□□ -0.83
Ccdc180J3QNE4 Gm44281-201ENSMUST00000203090 166 ntBASIC9.86□□□□□ -0.83
Ccdc180J3QNE4 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccdc180J3QNE4 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Ccdc180J3QNE4 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC9.86□□□□□ -0.83
Ccdc180J3QNE4 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Ccdc180J3QNE4 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ccdc180J3QNE4 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Ccdc180J3QNE4 Gm42994-201ENSMUST00000195964 2549 ntBASIC9.86□□□□□ -0.83
Ccdc180J3QNE4 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Gm43788-201ENSMUST00000201539 2417 ntBASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Gm16149-201ENSMUST00000117631 309 ntBASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Gm12444-201ENSMUST00000121512 877 ntBASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Gm11679-201ENSMUST00000121830 779 ntBASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 AC141425.1-201ENSMUST00000224989 265 ntBASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Gm25139-201ENSMUST00000083247 210 ntBASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Gm42843-201ENSMUST00000196328 3616 ntBASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
Ccdc180J3QNE4 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Gm44584-201ENSMUST00000208395 2880 ntBASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Gm3978-201ENSMUST00000163406 2512 ntBASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 AC154329.1-201ENSMUST00000224408 3129 ntBASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Ccdc180J3QNE4 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms