Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm28136-210ENSMUST00000191432 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29138-201ENSMUST00000191444 348 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm29251-201ENSMUST00000191480 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm28658-201ENSMUST00000191532 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm32180-201ENSMUST00000192415 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm30598-201ENSMUST00000192620 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm37511-201ENSMUST00000192901 294 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm18952-201ENSMUST00000194471 846 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm37627-201ENSMUST00000194585 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm7512-201ENSMUST00000195217 1170 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm34274-201ENSMUST00000195825 615 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm5711-201ENSMUST00000197896 421 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm4525-201ENSMUST00000198831 254 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm43089-201ENSMUST00000199162 275 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm3321-201ENSMUST00000200603 1129 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm9419-201ENSMUST00000200672 567 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm44281-201ENSMUST00000203090 166 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm44265-201ENSMUST00000203631 465 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm17987-201ENSMUST00000206902 603 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm44946-201ENSMUST00000208425 572 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 AC153852.1-201ENSMUST00000217881 567 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm5649-201ENSMUST00000217918 951 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 AC102369.1-201ENSMUST00000218415 373 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 CT030238.3-201ENSMUST00000227352 875 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Mir196a-1-201ENSMUST00000083612 102 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm10221-201ENSMUST00000088299 309 ntBASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Pcdh1F7BJK1 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm23527-201ENSMUST00000104570 130 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm14904-201ENSMUST00000117067 335 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm13141-201ENSMUST00000117417 456 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm14899-201ENSMUST00000118673 548 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm11913-201ENSMUST00000119094 336 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm15153-201ENSMUST00000119867 274 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm12041-201ENSMUST00000121606 602 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm12045-201ENSMUST00000122122 573 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm26211-201ENSMUST00000158578 129 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm16138-201ENSMUST00000159341 821 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm5456-201ENSMUST00000170706 844 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm17045-201ENSMUST00000178600 844 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm16531-201ENSMUST00000180658 967 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm1972-201ENSMUST00000181606 964 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm7654-201ENSMUST00000186738 683 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Mrgprb13-201ENSMUST00000188191 985 ntBASIC5.78□□□□□ -1.48
Pcdh1F7BJK1 Gm37380-201ENSMUST00000193752 397 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms