Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Mir6416-201ENSMUST00000183664 117 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm45081-201ENSMUST00000206281 572 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm45434-201ENSMUST00000210550 293 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm44039-201ENSMUST00000204192 2246 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Dsc3-201ENSMUST00000115848 5333 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm42630-201ENSMUST00000195908 3448 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm44022-201ENSMUST00000203708 5429 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 AC114585.1-201ENSMUST00000228080 3680 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm37884-201ENSMUST00000191857 818 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Olfr157-201ENSMUST00000214281 6617 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm11406-201ENSMUST00000117418 484 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm4540-201ENSMUST00000170669 429 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm37503-201ENSMUST00000192088 319 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm7449-201ENSMUST00000194393 663 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm18427-201ENSMUST00000195422 515 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm44354-201ENSMUST00000196017 143 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm24031-201ENSMUST00000083930 131 ntBASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col6a3E9PWQ3 Celf1-203ENSMUST00000068747 7614 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Zfp292-201ENSMUST00000047950 9986 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Gm43559-201ENSMUST00000198755 466 ntBASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Gm18891-201ENSMUST00000216734 1087 ntBASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Polr3f-201ENSMUST00000028914 4403 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Gm10855-201ENSMUST00000100426 2541 ntBASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Gm12149-201ENSMUST00000117511 654 ntBASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Gm14621-201ENSMUST00000117709 689 ntBASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Gm15012-201ENSMUST00000119176 106 ntBASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Gm27033-201ENSMUST00000183226 544 ntBASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Gm44003-201ENSMUST00000203024 490 ntBASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 AC132384.6-201ENSMUST00000218976 1206 ntBASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Snora52-201ENSMUST00000082732 137 ntBASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC5.16□□□□□ -1.58
Col6a3E9PWQ3 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.15□□□□□ -1.58
Col6a3E9PWQ3 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms