Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Gm42642-201ENSMUST00000200683 355 ntBASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afb3S4R1G7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2afb3S4R1G7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2afb3S4R1G7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
H2afb3S4R1G7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
H2afb3S4R1G7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
H2afb3S4R1G7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
H2afb3S4R1G7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
H2afb3S4R1G7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
H2afb3S4R1G7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
H2afb3S4R1G7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
H2afb3S4R1G7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
H2afb3S4R1G7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
H2afb3S4R1G7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
H2afb3S4R1G7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
H2afb3S4R1G7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
H2afb3S4R1G7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Gm10033-202ENSMUST00000211874 928 ntBASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
H2afb3S4R1G7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16■□□□□ 0.15
H2afb3S4R1G7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb3S4R1G7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb3S4R1G7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb3S4R1G7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb3S4R1G7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb3S4R1G7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16■□□□□ 0.15
H2afb3S4R1G7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb3S4R1G7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb3S4R1G7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16■□□□□ 0.15
H2afb3S4R1G7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16■□□□□ 0.15
H2afb3S4R1G7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16■□□□□ 0.15
H2afb3S4R1G7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16■□□□□ 0.15
H2afb3S4R1G7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb3S4R1G7 Gm5874-201ENSMUST00000096101 508 ntBASIC16■□□□□ 0.15
H2afb3S4R1G7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16■□□□□ 0.15
H2afb3S4R1G7 Gm37811-201ENSMUST00000192416 2601 ntBASIC16■□□□□ 0.15
H2afb3S4R1G7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb3S4R1G7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb3S4R1G7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
H2afb3S4R1G7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms