Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh17Q9R100 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh17Q9R100 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.36■□□□□ 0.37
Cdh17Q9R100 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh17Q9R100 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Cdh17Q9R100 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh17Q9R100 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.36■□□□□ 0.37
Cdh17Q9R100 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh17Q9R100 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cdh17Q9R100 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh17Q9R100 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh17Q9R100 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh17Q9R100 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh17Q9R100 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh17Q9R100 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh17Q9R100 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh17Q9R100 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh17Q9R100 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh17Q9R100 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cdh17Q9R100 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh17Q9R100 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh17Q9R100 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh17Q9R100 Gm38285-201ENSMUST00000192928 922 ntBASIC17.35■□□□□ 0.37
Cdh17Q9R100 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh17Q9R100 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh17Q9R100 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh17Q9R100 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh17Q9R100 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.35■□□□□ 0.37
Cdh17Q9R100 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh17Q9R100 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh17Q9R100 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh17Q9R100 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh17Q9R100 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh17Q9R100 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.35■□□□□ 0.37
Cdh17Q9R100 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh17Q9R100 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.34■□□□□ 0.37
Cdh17Q9R100 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh17Q9R100 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh17Q9R100 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.33■□□□□ 0.37
Cdh17Q9R100 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh17Q9R100 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh17Q9R100 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cdh17Q9R100 Gm2399-201ENSMUST00000104944 225 ntBASIC17.33■□□□□ 0.36
Cdh17Q9R100 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.33■□□□□ 0.36
Cdh17Q9R100 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh17Q9R100 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh17Q9R100 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh17Q9R100 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh17Q9R100 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh17Q9R100 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh17Q9R100 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh17Q9R100 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.33■□□□□ 0.36
Cdh17Q9R100 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Cdh17Q9R100 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh17Q9R100 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh17Q9R100 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh17Q9R100 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.33■□□□□ 0.36
Cdh17Q9R100 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh17Q9R100 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh17Q9R100 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh17Q9R100 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh17Q9R100 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh17Q9R100 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh17Q9R100 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh17Q9R100 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cdh17Q9R100 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cdh17Q9R100 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cdh17Q9R100 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh17Q9R100 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh17Q9R100 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh17Q9R100 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Cdh17Q9R100 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh17Q9R100 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh17Q9R100 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh17Q9R100 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh17Q9R100 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh17Q9R100 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh17Q9R100 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms