Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.46■□□□□ 0.54
Scn5aQ9JJV9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.45■□□□□ 0.54
Scn5aQ9JJV9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn5aQ9JJV9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn5aQ9JJV9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn5aQ9JJV9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn5aQ9JJV9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Scn5aQ9JJV9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn5aQ9JJV9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn5aQ9JJV9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn5aQ9JJV9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn5aQ9JJV9 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.45■□□□□ 0.54
Scn5aQ9JJV9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
Scn5aQ9JJV9 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.45■□□□□ 0.54
Scn5aQ9JJV9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn5aQ9JJV9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn5aQ9JJV9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Scn5aQ9JJV9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Scn5aQ9JJV9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.45■□□□□ 0.54
Scn5aQ9JJV9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn5aQ9JJV9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Scn5aQ9JJV9 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.44■□□□□ 0.54
Scn5aQ9JJV9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Scn5aQ9JJV9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.44■□□□□ 0.54
Scn5aQ9JJV9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn5aQ9JJV9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn5aQ9JJV9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn5aQ9JJV9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn5aQ9JJV9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn5aQ9JJV9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn5aQ9JJV9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Scn5aQ9JJV9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn5aQ9JJV9 Mir1668-201ENSMUST00000184114 107 ntBASIC18.44■□□□□ 0.54
Scn5aQ9JJV9 Gm37025-201ENSMUST00000195159 829 ntBASIC18.44■□□□□ 0.54
Scn5aQ9JJV9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn5aQ9JJV9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Scn5aQ9JJV9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn5aQ9JJV9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn5aQ9JJV9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn5aQ9JJV9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn5aQ9JJV9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn5aQ9JJV9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn5aQ9JJV9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn5aQ9JJV9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.43■□□□□ 0.54
Scn5aQ9JJV9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn5aQ9JJV9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Gm17661-201ENSMUST00000170317 270 ntBASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Gm28033-201ENSMUST00000184224 96 ntBASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.42■□□□□ 0.54
Scn5aQ9JJV9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn5aQ9JJV9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Scn5aQ9JJV9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Scn5aQ9JJV9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn5aQ9JJV9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn5aQ9JJV9 Gm27704-201ENSMUST00000185094 107 ntBASIC18.41■□□□□ 0.54
Scn5aQ9JJV9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn5aQ9JJV9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.41■□□□□ 0.54
Scn5aQ9JJV9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Scn5aQ9JJV9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Scn5aQ9JJV9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Scn5aQ9JJV9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn5aQ9JJV9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn5aQ9JJV9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn5aQ9JJV9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn5aQ9JJV9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn5aQ9JJV9 Golph3-205ENSMUST00000228671 2842 ntBASIC18.41■□□□□ 0.54
Scn5aQ9JJV9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn5aQ9JJV9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn5aQ9JJV9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.4■□□□□ 0.54
Scn5aQ9JJV9 Gm25016-201ENSMUST00000158399 131 ntBASIC18.4■□□□□ 0.54
Scn5aQ9JJV9 Gm24841-201ENSMUST00000158676 357 ntBASIC18.4■□□□□ 0.54
Scn5aQ9JJV9 Gm9731-201ENSMUST00000209480 747 ntBASIC18.4■□□□□ 0.54
Scn5aQ9JJV9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.4■□□□□ 0.54
Scn5aQ9JJV9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn5aQ9JJV9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Scn5aQ9JJV9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn5aQ9JJV9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.4■□□□□ 0.54
Scn5aQ9JJV9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms