Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Gm7514-201ENSMUST00000209475 934 ntBASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rbfox1Q9JJ43 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rbfox1Q9JJ43 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Rbfox1Q9JJ43 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rbfox1Q9JJ43 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rbfox1Q9JJ43 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rbfox1Q9JJ43 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.16■□□□□ 0.02
Rbfox1Q9JJ43 Nespas-201ENSMUST00000143738 1083 ntBASIC15.16■□□□□ 0.02
Rbfox1Q9JJ43 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rbfox1Q9JJ43 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.16■□□□□ 0.02
Rbfox1Q9JJ43 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rbfox1Q9JJ43 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rbfox1Q9JJ43 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rbfox1Q9JJ43 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rbfox1Q9JJ43 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.16■□□□□ 0.02
Rbfox1Q9JJ43 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rbfox1Q9JJ43 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rbfox1Q9JJ43 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rbfox1Q9JJ43 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rbfox1Q9JJ43 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.14■□□□□ 0.01
Rbfox1Q9JJ43 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rbfox1Q9JJ43 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.14■□□□□ 0.01
Rbfox1Q9JJ43 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rbfox1Q9JJ43 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.14■□□□□ 0.01
Rbfox1Q9JJ43 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.14■□□□□ 0.01
Rbfox1Q9JJ43 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rbfox1Q9JJ43 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rbfox1Q9JJ43 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.14■□□□□ 0.01
Rbfox1Q9JJ43 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rbfox1Q9JJ43 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rbfox1Q9JJ43 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rbfox1Q9JJ43 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rbfox1Q9JJ43 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rbfox1Q9JJ43 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.14■□□□□ 0.01
Rbfox1Q9JJ43 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rbfox1Q9JJ43 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rbfox1Q9JJ43 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rbfox1Q9JJ43 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rbfox1Q9JJ43 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rbfox1Q9JJ43 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rbfox1Q9JJ43 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.13■□□□□ 0.01
Rbfox1Q9JJ43 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rbfox1Q9JJ43 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Rbfox1Q9JJ43 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rbfox1Q9JJ43 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rbfox1Q9JJ43 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.13■□□□□ 0.01
Rbfox1Q9JJ43 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.13■□□□□ 0.01
Rbfox1Q9JJ43 Gm10033-202ENSMUST00000211874 928 ntBASIC15.13■□□□□ 0.01
Rbfox1Q9JJ43 Idnk-204ENSMUST00000226010 1898 ntBASIC15.13■□□□□ 0.01
Rbfox1Q9JJ43 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rbfox1Q9JJ43 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rbfox1Q9JJ43 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rbfox1Q9JJ43 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rbfox1Q9JJ43 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rbfox1Q9JJ43 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rbfox1Q9JJ43 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rbfox1Q9JJ43 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms