Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.13■□□□□ 0.33
Ube4bQ9ES00 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ube4bQ9ES00 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4bQ9ES00 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4bQ9ES00 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4bQ9ES00 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4bQ9ES00 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4bQ9ES00 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Ube4bQ9ES00 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4bQ9ES00 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4bQ9ES00 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4bQ9ES00 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4bQ9ES00 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4bQ9ES00 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.12■□□□□ 0.33
Ube4bQ9ES00 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4bQ9ES00 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4bQ9ES00 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4bQ9ES00 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Ube4bQ9ES00 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ube4bQ9ES00 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Ube4bQ9ES00 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4bQ9ES00 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4bQ9ES00 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ube4bQ9ES00 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4bQ9ES00 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ube4bQ9ES00 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ube4bQ9ES00 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4bQ9ES00 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4bQ9ES00 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4bQ9ES00 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4bQ9ES00 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4bQ9ES00 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4bQ9ES00 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4bQ9ES00 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Ube4bQ9ES00 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4bQ9ES00 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4bQ9ES00 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4bQ9ES00 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.1■□□□□ 0.33
Ube4bQ9ES00 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4bQ9ES00 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4bQ9ES00 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4bQ9ES00 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4bQ9ES00 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube4bQ9ES00 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4bQ9ES00 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4bQ9ES00 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4bQ9ES00 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4bQ9ES00 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4bQ9ES00 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4bQ9ES00 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.09■□□□□ 0.33
Ube4bQ9ES00 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.09■□□□□ 0.33
Ube4bQ9ES00 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Ube4bQ9ES00 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4bQ9ES00 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4bQ9ES00 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4bQ9ES00 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.09■□□□□ 0.33
Ube4bQ9ES00 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ube4bQ9ES00 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4bQ9ES00 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Ube4bQ9ES00 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ube4bQ9ES00 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ube4bQ9ES00 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ube4bQ9ES00 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ube4bQ9ES00 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ube4bQ9ES00 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Ube4bQ9ES00 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ube4bQ9ES00 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Ube4bQ9ES00 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ube4bQ9ES00 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4bQ9ES00 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.08■□□□□ 0.32
Ube4bQ9ES00 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.08■□□□□ 0.32
Ube4bQ9ES00 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ube4bQ9ES00 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4bQ9ES00 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4bQ9ES00 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4bQ9ES00 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4bQ9ES00 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4bQ9ES00 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4bQ9ES00 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4bQ9ES00 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.08■□□□□ 0.32
Ube4bQ9ES00 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4bQ9ES00 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4bQ9ES00 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4bQ9ES00 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Ube4bQ9ES00 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ube4bQ9ES00 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4bQ9ES00 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube4bQ9ES00 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Ube4bQ9ES00 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4bQ9ES00 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4bQ9ES00 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4bQ9ES00 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Ube4bQ9ES00 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.07■□□□□ 0.32
Ube4bQ9ES00 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4bQ9ES00 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4bQ9ES00 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4bQ9ES00 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.07■□□□□ 0.32
Ube4bQ9ES00 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ube4bQ9ES00 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ube4bQ9ES00 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms