Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-4Q9EQM3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-4Q9EQM3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-4Q9EQM3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-4Q9EQM3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-4Q9EQM3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-4Q9EQM3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.31■□□□□ 0.52
Nkx2-4Q9EQM3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.31■□□□□ 0.52
Nkx2-4Q9EQM3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-4Q9EQM3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-4Q9EQM3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Nkx2-4Q9EQM3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Nkx2-4Q9EQM3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Nkx2-4Q9EQM3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-4Q9EQM3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-4Q9EQM3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-4Q9EQM3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-4Q9EQM3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-4Q9EQM3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-4Q9EQM3 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.3■□□□□ 0.52
Nkx2-4Q9EQM3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-4Q9EQM3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-4Q9EQM3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.3■□□□□ 0.52
Nkx2-4Q9EQM3 Gm24841-201ENSMUST00000158676 357 ntBASIC18.3■□□□□ 0.52
Nkx2-4Q9EQM3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.3■□□□□ 0.52
Nkx2-4Q9EQM3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-4Q9EQM3 Gm27357-201ENSMUST00000183754 135 ntBASIC18.3■□□□□ 0.52
Nkx2-4Q9EQM3 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.3■□□□□ 0.52
Nkx2-4Q9EQM3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-4Q9EQM3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-4Q9EQM3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-4Q9EQM3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-4Q9EQM3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-4Q9EQM3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-4Q9EQM3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-4Q9EQM3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-4Q9EQM3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-4Q9EQM3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-4Q9EQM3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-4Q9EQM3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-4Q9EQM3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.28■□□□□ 0.52
Nkx2-4Q9EQM3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-4Q9EQM3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-4Q9EQM3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.28■□□□□ 0.52
Nkx2-4Q9EQM3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-4Q9EQM3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-4Q9EQM3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Nkx2-4Q9EQM3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Nkx2-4Q9EQM3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Nkx2-4Q9EQM3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-4Q9EQM3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
Nkx2-4Q9EQM3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.27■□□□□ 0.52
Nkx2-4Q9EQM3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.27■□□□□ 0.52
Nkx2-4Q9EQM3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Nkx2-4Q9EQM3 Gm27742-201ENSMUST00000184667 60 ntBASIC18.27■□□□□ 0.52
Nkx2-4Q9EQM3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-4Q9EQM3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-4Q9EQM3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-4Q9EQM3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nkx2-4Q9EQM3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-4Q9EQM3 Notumos-201ENSMUST00000151998 2659 ntBASIC18.26■□□□□ 0.51
Nkx2-4Q9EQM3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-4Q9EQM3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-4Q9EQM3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-4Q9EQM3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-4Q9EQM3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-4Q9EQM3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-4Q9EQM3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.26■□□□□ 0.51
Nkx2-4Q9EQM3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-4Q9EQM3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.26■□□□□ 0.51
Nkx2-4Q9EQM3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Nkx2-4Q9EQM3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-4Q9EQM3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-4Q9EQM3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-4Q9EQM3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-4Q9EQM3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-4Q9EQM3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.25■□□□□ 0.51
Nkx2-4Q9EQM3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-4Q9EQM3 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.25■□□□□ 0.51
Nkx2-4Q9EQM3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-4Q9EQM3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-4Q9EQM3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-4Q9EQM3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-4Q9EQM3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-4Q9EQM3 Gm6623-201ENSMUST00000173570 544 ntBASIC18.25■□□□□ 0.51
Nkx2-4Q9EQM3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Nkx2-4Q9EQM3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Nkx2-4Q9EQM3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Nkx2-4Q9EQM3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-4Q9EQM3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-4Q9EQM3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.25■□□□□ 0.51
Nkx2-4Q9EQM3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Nkx2-4Q9EQM3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-4Q9EQM3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-4Q9EQM3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-4Q9EQM3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.24■□□□□ 0.51
Nkx2-4Q9EQM3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-4Q9EQM3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-4Q9EQM3 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.24■□□□□ 0.51
Nkx2-4Q9EQM3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms