Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Chmp2aQ9DB34 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Chmp2aQ9DB34 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Chmp2aQ9DB34 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp2aQ9DB34 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp2aQ9DB34 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp2aQ9DB34 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp2aQ9DB34 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp2aQ9DB34 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp2aQ9DB34 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp2aQ9DB34 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp2aQ9DB34 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp2aQ9DB34 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.58■□□□□ 0.56
Chmp2aQ9DB34 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Chmp2aQ9DB34 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.58■□□□□ 0.56
Chmp2aQ9DB34 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp2aQ9DB34 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp2aQ9DB34 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp2aQ9DB34 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 Gm20760-201ENSMUST00000179197 648 ntBASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2aQ9DB34 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp2aQ9DB34 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp2aQ9DB34 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Chmp2aQ9DB34 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Chmp2aQ9DB34 Tgds-204ENSMUST00000228543 1594 ntBASIC18.56■□□□□ 0.56
Chmp2aQ9DB34 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp2aQ9DB34 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp2aQ9DB34 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp2aQ9DB34 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Chmp2aQ9DB34 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Chmp2aQ9DB34 Grk6-206ENSMUST00000224995 2971 ntBASIC18.56■□□□□ 0.56
Chmp2aQ9DB34 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp2aQ9DB34 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Gm38285-201ENSMUST00000192928 922 ntBASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.55■□□□□ 0.56
Chmp2aQ9DB34 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp2aQ9DB34 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.54■□□□□ 0.56
Chmp2aQ9DB34 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp2aQ9DB34 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp2aQ9DB34 Gm13168-201ENSMUST00000121771 632 ntBASIC18.54■□□□□ 0.56
Chmp2aQ9DB34 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.54■□□□□ 0.56
Chmp2aQ9DB34 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.54■□□□□ 0.56
Chmp2aQ9DB34 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp2aQ9DB34 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.54■□□□□ 0.56
Chmp2aQ9DB34 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp2aQ9DB34 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp2aQ9DB34 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Chmp2aQ9DB34 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp2aQ9DB34 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp2aQ9DB34 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Chmp2aQ9DB34 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp2aQ9DB34 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp2aQ9DB34 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.53■□□□□ 0.56
Chmp2aQ9DB34 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Chmp2aQ9DB34 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Chmp2aQ9DB34 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp2aQ9DB34 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp2aQ9DB34 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp2aQ9DB34 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp2aQ9DB34 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms