Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpap3Q9D706 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rpap3Q9D706 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rpap3Q9D706 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Rpap3Q9D706 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rpap3Q9D706 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rpap3Q9D706 Gm12085-201ENSMUST00000119263 940 ntBASIC19.64■□□□□ 0.73
Rpap3Q9D706 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpap3Q9D706 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.64■□□□□ 0.73
Rpap3Q9D706 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.64■□□□□ 0.73
Rpap3Q9D706 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpap3Q9D706 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rpap3Q9D706 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpap3Q9D706 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpap3Q9D706 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpap3Q9D706 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpap3Q9D706 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.64■□□□□ 0.73
Rpap3Q9D706 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpap3Q9D706 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpap3Q9D706 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpap3Q9D706 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rpap3Q9D706 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpap3Q9D706 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rpap3Q9D706 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.63■□□□□ 0.73
Rpap3Q9D706 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.63■□□□□ 0.73
Rpap3Q9D706 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.63■□□□□ 0.73
Rpap3Q9D706 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rpap3Q9D706 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpap3Q9D706 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.63■□□□□ 0.73
Rpap3Q9D706 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpap3Q9D706 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rpap3Q9D706 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpap3Q9D706 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpap3Q9D706 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.62■□□□□ 0.73
Rpap3Q9D706 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap3Q9D706 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap3Q9D706 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap3Q9D706 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap3Q9D706 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap3Q9D706 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap3Q9D706 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap3Q9D706 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap3Q9D706 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap3Q9D706 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.62■□□□□ 0.73
Rpap3Q9D706 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap3Q9D706 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.62■□□□□ 0.73
Rpap3Q9D706 Gm38027-201ENSMUST00000192315 235 ntBASIC19.62■□□□□ 0.73
Rpap3Q9D706 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap3Q9D706 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.62■□□□□ 0.73
Rpap3Q9D706 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap3Q9D706 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.62■□□□□ 0.73
Rpap3Q9D706 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap3Q9D706 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap3Q9D706 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpap3Q9D706 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap3Q9D706 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap3Q9D706 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap3Q9D706 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap3Q9D706 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap3Q9D706 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap3Q9D706 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap3Q9D706 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.61■□□□□ 0.73
Rpap3Q9D706 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.61■□□□□ 0.73
Rpap3Q9D706 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap3Q9D706 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap3Q9D706 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap3Q9D706 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.61■□□□□ 0.73
Rpap3Q9D706 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap3Q9D706 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Rpap3Q9D706 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap3Q9D706 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap3Q9D706 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap3Q9D706 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap3Q9D706 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpap3Q9D706 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap3Q9D706 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap3Q9D706 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap3Q9D706 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap3Q9D706 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap3Q9D706 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap3Q9D706 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.6■□□□□ 0.73
Rpap3Q9D706 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.6■□□□□ 0.73
Rpap3Q9D706 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.6■□□□□ 0.73
Rpap3Q9D706 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap3Q9D706 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap3Q9D706 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap3Q9D706 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap3Q9D706 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap3Q9D706 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap3Q9D706 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpap3Q9D706 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap3Q9D706 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap3Q9D706 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap3Q9D706 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap3Q9D706 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap3Q9D706 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap3Q9D706 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap3Q9D706 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rpap3Q9D706 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpap3Q9D706 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms