Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.89■□□□□ 0.61
Vps33aQ9D2N9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Vps33aQ9D2N9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vps33aQ9D2N9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vps33aQ9D2N9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vps33aQ9D2N9 Gm45102-201ENSMUST00000207427 857 ntBASIC18.89■□□□□ 0.61
Vps33aQ9D2N9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps33aQ9D2N9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vps33aQ9D2N9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Vps33aQ9D2N9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps33aQ9D2N9 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.89■□□□□ 0.61
Vps33aQ9D2N9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps33aQ9D2N9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps33aQ9D2N9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps33aQ9D2N9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps33aQ9D2N9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Vps33aQ9D2N9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps33aQ9D2N9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Vps33aQ9D2N9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps33aQ9D2N9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps33aQ9D2N9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Vps33aQ9D2N9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps33aQ9D2N9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps33aQ9D2N9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps33aQ9D2N9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps33aQ9D2N9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps33aQ9D2N9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps33aQ9D2N9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps33aQ9D2N9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps33aQ9D2N9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Vps33aQ9D2N9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Vps33aQ9D2N9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.87■□□□□ 0.61
Vps33aQ9D2N9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Vps33aQ9D2N9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps33aQ9D2N9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps33aQ9D2N9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps33aQ9D2N9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps33aQ9D2N9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
Vps33aQ9D2N9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps33aQ9D2N9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps33aQ9D2N9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps33aQ9D2N9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps33aQ9D2N9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vps33aQ9D2N9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps33aQ9D2N9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Vps33aQ9D2N9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps33aQ9D2N9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps33aQ9D2N9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps33aQ9D2N9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps33aQ9D2N9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Vps33aQ9D2N9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps33aQ9D2N9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps33aQ9D2N9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps33aQ9D2N9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps33aQ9D2N9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Vps33aQ9D2N9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vps33aQ9D2N9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps33aQ9D2N9 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.86■□□□□ 0.61
Vps33aQ9D2N9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.86■□□□□ 0.61
Vps33aQ9D2N9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps33aQ9D2N9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps33aQ9D2N9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps33aQ9D2N9 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.85■□□□□ 0.61
Vps33aQ9D2N9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps33aQ9D2N9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps33aQ9D2N9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Vps33aQ9D2N9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps33aQ9D2N9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Vps33aQ9D2N9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps33aQ9D2N9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps33aQ9D2N9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps33aQ9D2N9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps33aQ9D2N9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps33aQ9D2N9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps33aQ9D2N9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps33aQ9D2N9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps33aQ9D2N9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Vps33aQ9D2N9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps33aQ9D2N9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps33aQ9D2N9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Vps33aQ9D2N9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps33aQ9D2N9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps33aQ9D2N9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps33aQ9D2N9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Vps33aQ9D2N9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.84■□□□□ 0.61
Vps33aQ9D2N9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Vps33aQ9D2N9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps33aQ9D2N9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps33aQ9D2N9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps33aQ9D2N9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps33aQ9D2N9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps33aQ9D2N9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps33aQ9D2N9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps33aQ9D2N9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps33aQ9D2N9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Vps33aQ9D2N9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps33aQ9D2N9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps33aQ9D2N9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps33aQ9D2N9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps33aQ9D2N9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms