Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rita1Q9D1H0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rita1Q9D1H0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rita1Q9D1H0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rita1Q9D1H0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rita1Q9D1H0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rita1Q9D1H0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Rita1Q9D1H0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Rita1Q9D1H0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rita1Q9D1H0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rita1Q9D1H0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rita1Q9D1H0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rita1Q9D1H0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rita1Q9D1H0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rita1Q9D1H0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.41■□□□□ 0.22
Rita1Q9D1H0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rita1Q9D1H0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rita1Q9D1H0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.41■□□□□ 0.22
Rita1Q9D1H0 Gm13401-201ENSMUST00000117074 291 ntBASIC16.41■□□□□ 0.22
Rita1Q9D1H0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.41■□□□□ 0.22
Rita1Q9D1H0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rita1Q9D1H0 Mir6982-201ENSMUST00000184354 68 ntBASIC16.41■□□□□ 0.22
Rita1Q9D1H0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rita1Q9D1H0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rita1Q9D1H0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rita1Q9D1H0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rita1Q9D1H0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rita1Q9D1H0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rita1Q9D1H0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rita1Q9D1H0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rita1Q9D1H0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rita1Q9D1H0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.4■□□□□ 0.22
Rita1Q9D1H0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rita1Q9D1H0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rita1Q9D1H0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.4■□□□□ 0.22
Rita1Q9D1H0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rita1Q9D1H0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rita1Q9D1H0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rita1Q9D1H0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rita1Q9D1H0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rita1Q9D1H0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rita1Q9D1H0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rita1Q9D1H0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.39■□□□□ 0.21
Rita1Q9D1H0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rita1Q9D1H0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rita1Q9D1H0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rita1Q9D1H0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rita1Q9D1H0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rita1Q9D1H0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rita1Q9D1H0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Rita1Q9D1H0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rita1Q9D1H0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rita1Q9D1H0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Rita1Q9D1H0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rita1Q9D1H0 Mir5122-201ENSMUST00000175004 89 ntBASIC16.38■□□□□ 0.21
Rita1Q9D1H0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rita1Q9D1H0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Rita1Q9D1H0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.38■□□□□ 0.21
Rita1Q9D1H0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rita1Q9D1H0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rita1Q9D1H0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rita1Q9D1H0 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.38■□□□□ 0.21
Rita1Q9D1H0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rita1Q9D1H0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Rita1Q9D1H0 Idnk-204ENSMUST00000226010 1898 ntBASIC16.37■□□□□ 0.21
Rita1Q9D1H0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.37■□□□□ 0.21
Rita1Q9D1H0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rita1Q9D1H0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.37■□□□□ 0.21
Rita1Q9D1H0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rita1Q9D1H0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rita1Q9D1H0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rita1Q9D1H0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rita1Q9D1H0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rita1Q9D1H0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.37■□□□□ 0.21
Rita1Q9D1H0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rita1Q9D1H0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms