Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upk1aQ9D132 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Upk1aQ9D132 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.92■□□□□ 0.3
Upk1aQ9D132 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upk1aQ9D132 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Upk1aQ9D132 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.92■□□□□ 0.3
Upk1aQ9D132 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.92■□□□□ 0.3
Upk1aQ9D132 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Upk1aQ9D132 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upk1aQ9D132 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upk1aQ9D132 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upk1aQ9D132 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Upk1aQ9D132 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Upk1aQ9D132 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Upk1aQ9D132 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Upk1aQ9D132 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Upk1aQ9D132 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upk1aQ9D132 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upk1aQ9D132 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upk1aQ9D132 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.91■□□□□ 0.3
Upk1aQ9D132 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Upk1aQ9D132 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.91■□□□□ 0.3
Upk1aQ9D132 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upk1aQ9D132 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upk1aQ9D132 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upk1aQ9D132 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upk1aQ9D132 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Upk1aQ9D132 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Upk1aQ9D132 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Upk1aQ9D132 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk1aQ9D132 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk1aQ9D132 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk1aQ9D132 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk1aQ9D132 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk1aQ9D132 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Upk1aQ9D132 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk1aQ9D132 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Upk1aQ9D132 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Upk1aQ9D132 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Upk1aQ9D132 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Upk1aQ9D132 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk1aQ9D132 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk1aQ9D132 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Upk1aQ9D132 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk1aQ9D132 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk1aQ9D132 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk1aQ9D132 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Upk1aQ9D132 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Upk1aQ9D132 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Upk1aQ9D132 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk1aQ9D132 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Upk1aQ9D132 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk1aQ9D132 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Upk1aQ9D132 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
Upk1aQ9D132 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk1aQ9D132 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Upk1aQ9D132 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.89■□□□□ 0.29
Upk1aQ9D132 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk1aQ9D132 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upk1aQ9D132 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1aQ9D132 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1aQ9D132 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1aQ9D132 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1aQ9D132 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Upk1aQ9D132 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1aQ9D132 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1aQ9D132 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.88■□□□□ 0.29
Upk1aQ9D132 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1aQ9D132 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1aQ9D132 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1aQ9D132 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.88■□□□□ 0.29
Upk1aQ9D132 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1aQ9D132 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1aQ9D132 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1aQ9D132 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1aQ9D132 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upk1aQ9D132 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1aQ9D132 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Upk1aQ9D132 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1aQ9D132 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1aQ9D132 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1aQ9D132 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1aQ9D132 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.87■□□□□ 0.29
Upk1aQ9D132 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1aQ9D132 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Upk1aQ9D132 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1aQ9D132 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Upk1aQ9D132 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Upk1aQ9D132 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1aQ9D132 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1aQ9D132 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upk1aQ9D132 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1aQ9D132 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.86■□□□□ 0.29
Upk1aQ9D132 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1aQ9D132 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Upk1aQ9D132 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms