Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim13Q9CYB0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim13Q9CYB0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.48■□□□□ 0.23
Trim13Q9CYB0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim13Q9CYB0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim13Q9CYB0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Trim13Q9CYB0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim13Q9CYB0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim13Q9CYB0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim13Q9CYB0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
Trim13Q9CYB0 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.48■□□□□ 0.23
Trim13Q9CYB0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.48■□□□□ 0.23
Trim13Q9CYB0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim13Q9CYB0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim13Q9CYB0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim13Q9CYB0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim13Q9CYB0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim13Q9CYB0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim13Q9CYB0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim13Q9CYB0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim13Q9CYB0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Trim13Q9CYB0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim13Q9CYB0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim13Q9CYB0 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.47■□□□□ 0.23
Trim13Q9CYB0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim13Q9CYB0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim13Q9CYB0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trim13Q9CYB0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim13Q9CYB0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim13Q9CYB0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim13Q9CYB0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trim13Q9CYB0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim13Q9CYB0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim13Q9CYB0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim13Q9CYB0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim13Q9CYB0 Tgds-204ENSMUST00000228543 1594 ntBASIC16.47■□□□□ 0.23
Trim13Q9CYB0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim13Q9CYB0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim13Q9CYB0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim13Q9CYB0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim13Q9CYB0 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.46■□□□□ 0.23
Trim13Q9CYB0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim13Q9CYB0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trim13Q9CYB0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.46■□□□□ 0.23
Trim13Q9CYB0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.46■□□□□ 0.23
Trim13Q9CYB0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim13Q9CYB0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim13Q9CYB0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim13Q9CYB0 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.46■□□□□ 0.23
Trim13Q9CYB0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim13Q9CYB0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim13Q9CYB0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim13Q9CYB0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim13Q9CYB0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim13Q9CYB0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim13Q9CYB0 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.45■□□□□ 0.22
Trim13Q9CYB0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.45■□□□□ 0.22
Trim13Q9CYB0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.45■□□□□ 0.22
Trim13Q9CYB0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim13Q9CYB0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim13Q9CYB0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.45■□□□□ 0.22
Trim13Q9CYB0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim13Q9CYB0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim13Q9CYB0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.45■□□□□ 0.22
Trim13Q9CYB0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms