Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.95■□□□□ 0.94
Smc3Q9CW03 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc3Q9CW03 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.95■□□□□ 0.94
Smc3Q9CW03 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
Smc3Q9CW03 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc3Q9CW03 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc3Q9CW03 Gm5874-201ENSMUST00000096101 508 ntBASIC20.95■□□□□ 0.94
Smc3Q9CW03 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc3Q9CW03 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc3Q9CW03 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Smc3Q9CW03 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smc3Q9CW03 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc3Q9CW03 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Smc3Q9CW03 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc3Q9CW03 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smc3Q9CW03 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Smc3Q9CW03 AV356131-201ENSMUST00000206201 750 ntBASIC20.94■□□□□ 0.94
Smc3Q9CW03 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc3Q9CW03 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc3Q9CW03 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smc3Q9CW03 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc3Q9CW03 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
Smc3Q9CW03 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc3Q9CW03 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc3Q9CW03 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc3Q9CW03 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc3Q9CW03 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc3Q9CW03 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Smc3Q9CW03 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Smc3Q9CW03 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc3Q9CW03 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc3Q9CW03 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smc3Q9CW03 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc3Q9CW03 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc3Q9CW03 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.93■□□□□ 0.94
Smc3Q9CW03 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc3Q9CW03 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc3Q9CW03 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Smc3Q9CW03 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc3Q9CW03 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc3Q9CW03 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.93■□□□□ 0.94
Smc3Q9CW03 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc3Q9CW03 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smc3Q9CW03 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Smc3Q9CW03 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc3Q9CW03 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc3Q9CW03 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc3Q9CW03 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.92■□□□□ 0.94
Smc3Q9CW03 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc3Q9CW03 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc3Q9CW03 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc3Q9CW03 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smc3Q9CW03 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smc3Q9CW03 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smc3Q9CW03 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smc3Q9CW03 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
Smc3Q9CW03 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.92■□□□□ 0.94
Smc3Q9CW03 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc3Q9CW03 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Smc3Q9CW03 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.92■□□□□ 0.94
Smc3Q9CW03 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc3Q9CW03 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc3Q9CW03 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc3Q9CW03 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Smc3Q9CW03 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc3Q9CW03 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc3Q9CW03 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smc3Q9CW03 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.91■□□□□ 0.94
Smc3Q9CW03 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smc3Q9CW03 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc3Q9CW03 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.91■□□□□ 0.94
Smc3Q9CW03 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smc3Q9CW03 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc3Q9CW03 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.91■□□□□ 0.94
Smc3Q9CW03 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc3Q9CW03 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc3Q9CW03 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc3Q9CW03 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Smc3Q9CW03 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc3Q9CW03 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc3Q9CW03 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc3Q9CW03 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc3Q9CW03 Idnk-204ENSMUST00000226010 1898 ntBASIC20.9■□□□□ 0.94
Smc3Q9CW03 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.9■□□□□ 0.94
Smc3Q9CW03 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc3Q9CW03 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Smc3Q9CW03 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Smc3Q9CW03 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc3Q9CW03 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smc3Q9CW03 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Smc3Q9CW03 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc3Q9CW03 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc3Q9CW03 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc3Q9CW03 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc3Q9CW03 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc3Q9CW03 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Smc3Q9CW03 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smc3Q9CW03 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smc3Q9CW03 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smc3Q9CW03 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms