Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.82■□□□□ 0.76
Ccdc43Q9CR29 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc43Q9CR29 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc43Q9CR29 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.81■□□□□ 0.76
Ccdc43Q9CR29 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc43Q9CR29 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc43Q9CR29 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc43Q9CR29 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc43Q9CR29 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Ccdc43Q9CR29 Gm7291-201ENSMUST00000199147 382 ntBASIC19.81■□□□□ 0.76
Ccdc43Q9CR29 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc43Q9CR29 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc43Q9CR29 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc43Q9CR29 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc43Q9CR29 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc43Q9CR29 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc43Q9CR29 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc43Q9CR29 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.8■□□□□ 0.76
Ccdc43Q9CR29 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc43Q9CR29 Gm7290-201ENSMUST00000104990 617 ntBASIC19.8■□□□□ 0.76
Ccdc43Q9CR29 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ccdc43Q9CR29 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.8■□□□□ 0.76
Ccdc43Q9CR29 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc43Q9CR29 Gm12918-201ENSMUST00000120234 636 ntBASIC19.8■□□□□ 0.76
Ccdc43Q9CR29 Gm15710-201ENSMUST00000121821 636 ntBASIC19.8■□□□□ 0.76
Ccdc43Q9CR29 Gm5075-201ENSMUST00000196916 622 ntBASIC19.8■□□□□ 0.76
Ccdc43Q9CR29 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.8■□□□□ 0.76
Ccdc43Q9CR29 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.8■□□□□ 0.76
Ccdc43Q9CR29 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc43Q9CR29 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc43Q9CR29 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc43Q9CR29 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ccdc43Q9CR29 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc43Q9CR29 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc43Q9CR29 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc43Q9CR29 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc43Q9CR29 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc43Q9CR29 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc43Q9CR29 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc43Q9CR29 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc43Q9CR29 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc43Q9CR29 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.79■□□□□ 0.76
Ccdc43Q9CR29 Gm6211-202ENSMUST00000167849 925 ntBASIC19.79■□□□□ 0.76
Ccdc43Q9CR29 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc43Q9CR29 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc43Q9CR29 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc43Q9CR29 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc43Q9CR29 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc43Q9CR29 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
Ccdc43Q9CR29 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.79■□□□□ 0.76
Ccdc43Q9CR29 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc43Q9CR29 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Ccdc43Q9CR29 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc43Q9CR29 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc43Q9CR29 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.78■□□□□ 0.76
Ccdc43Q9CR29 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.78■□□□□ 0.76
Ccdc43Q9CR29 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc43Q9CR29 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc43Q9CR29 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.78■□□□□ 0.76
Ccdc43Q9CR29 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc43Q9CR29 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc43Q9CR29 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc43Q9CR29 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ccdc43Q9CR29 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.78■□□□□ 0.76
Ccdc43Q9CR29 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc43Q9CR29 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc43Q9CR29 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc43Q9CR29 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc43Q9CR29 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc43Q9CR29 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc43Q9CR29 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Ccdc43Q9CR29 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc43Q9CR29 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc43Q9CR29 Mir5133-201ENSMUST00000174955 77 ntBASIC19.77■□□□□ 0.76
Ccdc43Q9CR29 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc43Q9CR29 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc43Q9CR29 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc43Q9CR29 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc43Q9CR29 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc43Q9CR29 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc43Q9CR29 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Ccdc43Q9CR29 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Ccdc43Q9CR29 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc43Q9CR29 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.76■□□□□ 0.75
Ccdc43Q9CR29 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc43Q9CR29 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc43Q9CR29 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc43Q9CR29 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc43Q9CR29 Gm22325-201ENSMUST00000158904 308 ntBASIC19.76■□□□□ 0.75
Ccdc43Q9CR29 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.76■□□□□ 0.75
Ccdc43Q9CR29 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Ccdc43Q9CR29 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc43Q9CR29 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc43Q9CR29 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc43Q9CR29 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc43Q9CR29 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc43Q9CR29 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc43Q9CR29 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc43Q9CR29 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc43Q9CR29 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms