Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldnd1Q9CQX5 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldnd1Q9CQX5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldnd1Q9CQX5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cldnd1Q9CQX5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cldnd1Q9CQX5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Cldnd1Q9CQX5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cldnd1Q9CQX5 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldnd1Q9CQX5 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldnd1Q9CQX5 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.28■□□□□ 0.52
Cldnd1Q9CQX5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldnd1Q9CQX5 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cldnd1Q9CQX5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldnd1Q9CQX5 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.27■□□□□ 0.52
Cldnd1Q9CQX5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldnd1Q9CQX5 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldnd1Q9CQX5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldnd1Q9CQX5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldnd1Q9CQX5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldnd1Q9CQX5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldnd1Q9CQX5 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Cldnd1Q9CQX5 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cldnd1Q9CQX5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldnd1Q9CQX5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldnd1Q9CQX5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldnd1Q9CQX5 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldnd1Q9CQX5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldnd1Q9CQX5 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cldnd1Q9CQX5 Gm11355-201ENSMUST00000121120 306 ntBASIC18.26■□□□□ 0.51
Cldnd1Q9CQX5 Gm18958-201ENSMUST00000174258 762 ntBASIC18.26■□□□□ 0.51
Cldnd1Q9CQX5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cldnd1Q9CQX5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldnd1Q9CQX5 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldnd1Q9CQX5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cldnd1Q9CQX5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cldnd1Q9CQX5 Mir3081-201ENSMUST00000175305 84 ntBASIC18.25■□□□□ 0.51
Cldnd1Q9CQX5 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.25■□□□□ 0.51
Cldnd1Q9CQX5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldnd1Q9CQX5 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Cldnd1Q9CQX5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldnd1Q9CQX5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldnd1Q9CQX5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldnd1Q9CQX5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldnd1Q9CQX5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldnd1Q9CQX5 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cldnd1Q9CQX5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldnd1Q9CQX5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldnd1Q9CQX5 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldnd1Q9CQX5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldnd1Q9CQX5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cldnd1Q9CQX5 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.24■□□□□ 0.51
Cldnd1Q9CQX5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldnd1Q9CQX5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldnd1Q9CQX5 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cldnd1Q9CQX5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cldnd1Q9CQX5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldnd1Q9CQX5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldnd1Q9CQX5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldnd1Q9CQX5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldnd1Q9CQX5 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldnd1Q9CQX5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldnd1Q9CQX5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldnd1Q9CQX5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldnd1Q9CQX5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldnd1Q9CQX5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldnd1Q9CQX5 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cldnd1Q9CQX5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cldnd1Q9CQX5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Cldnd1Q9CQX5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.23■□□□□ 0.51
Cldnd1Q9CQX5 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.23■□□□□ 0.51
Cldnd1Q9CQX5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cldnd1Q9CQX5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.23■□□□□ 0.51
Cldnd1Q9CQX5 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldnd1Q9CQX5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.23■□□□□ 0.51
Cldnd1Q9CQX5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldnd1Q9CQX5 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Gm11950-201ENSMUST00000121615 838 ntBASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Mzt1-203ENSMUST00000227948 952 ntBASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldnd1Q9CQX5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms