Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim34aQ99PP6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim34aQ99PP6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Trim34aQ99PP6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
Trim34aQ99PP6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim34aQ99PP6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC21.99■■□□□ 1.11
Trim34aQ99PP6 Gm6728-201ENSMUST00000178117 1065 ntBASIC21.99■■□□□ 1.11
Trim34aQ99PP6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Trim34aQ99PP6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim34aQ99PP6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim34aQ99PP6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Trim34aQ99PP6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim34aQ99PP6 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.98■■□□□ 1.11
Trim34aQ99PP6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim34aQ99PP6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim34aQ99PP6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
Trim34aQ99PP6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
Trim34aQ99PP6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim34aQ99PP6 AA414768-201ENSMUST00000121924 1257 ntBASIC21.98■■□□□ 1.11
Trim34aQ99PP6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.98■■□□□ 1.11
Trim34aQ99PP6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim34aQ99PP6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim34aQ99PP6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim34aQ99PP6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim34aQ99PP6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim34aQ99PP6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim34aQ99PP6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Trim34aQ99PP6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim34aQ99PP6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trim34aQ99PP6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim34aQ99PP6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim34aQ99PP6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim34aQ99PP6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim34aQ99PP6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim34aQ99PP6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim34aQ99PP6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim34aQ99PP6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim34aQ99PP6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim34aQ99PP6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC21.97■■□□□ 1.11
Trim34aQ99PP6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim34aQ99PP6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim34aQ99PP6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim34aQ99PP6 Tgds-204ENSMUST00000228543 1594 ntBASIC21.96■■□□□ 1.11
Trim34aQ99PP6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
Trim34aQ99PP6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim34aQ99PP6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim34aQ99PP6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim34aQ99PP6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim34aQ99PP6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.96■■□□□ 1.11
Trim34aQ99PP6 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.96■■□□□ 1.11
Trim34aQ99PP6 AC134329.2-201ENSMUST00000217897 428 ntBASIC21.96■■□□□ 1.11
Trim34aQ99PP6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
Trim34aQ99PP6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim34aQ99PP6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim34aQ99PP6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim34aQ99PP6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.95■■□□□ 1.1
Trim34aQ99PP6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC21.95■■□□□ 1.1
Trim34aQ99PP6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim34aQ99PP6 Gm18101-201ENSMUST00000215769 548 ntBASIC21.95■■□□□ 1.1
Trim34aQ99PP6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC21.95■■□□□ 1.1
Trim34aQ99PP6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim34aQ99PP6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim34aQ99PP6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim34aQ99PP6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim34aQ99PP6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim34aQ99PP6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim34aQ99PP6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.94■■□□□ 1.1
Trim34aQ99PP6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim34aQ99PP6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
Trim34aQ99PP6 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.94■■□□□ 1.1
Trim34aQ99PP6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim34aQ99PP6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim34aQ99PP6 Gm22697-201ENSMUST00000175194 63 ntBASIC21.94■■□□□ 1.1
Trim34aQ99PP6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim34aQ99PP6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim34aQ99PP6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Trim34aQ99PP6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Trim34aQ99PP6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC21.94■■□□□ 1.1
Trim34aQ99PP6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Trim34aQ99PP6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim34aQ99PP6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim34aQ99PP6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim34aQ99PP6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim34aQ99PP6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim34aQ99PP6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.93■■□□□ 1.1
Trim34aQ99PP6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Trim34aQ99PP6 Gm13401-201ENSMUST00000117074 291 ntBASIC21.93■■□□□ 1.1
Trim34aQ99PP6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trim34aQ99PP6 Gm6345-202ENSMUST00000180900 204 ntBASIC21.93■■□□□ 1.1
Trim34aQ99PP6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.93■■□□□ 1.1
Trim34aQ99PP6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim34aQ99PP6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Trim34aQ99PP6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim34aQ99PP6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim34aQ99PP6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim34aQ99PP6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim34aQ99PP6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim34aQ99PP6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.92■■□□□ 1.1
Trim34aQ99PP6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim34aQ99PP6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.92■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms