Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hdac9Q99N13 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.99■□□□□ 0.95
Hdac9Q99N13 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hdac9Q99N13 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hdac9Q99N13 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hdac9Q99N13 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac9Q99N13 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Hdac9Q99N13 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac9Q99N13 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac9Q99N13 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Hdac9Q99N13 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Hdac9Q99N13 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac9Q99N13 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.98■□□□□ 0.95
Hdac9Q99N13 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.98■□□□□ 0.95
Hdac9Q99N13 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Hdac9Q99N13 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac9Q99N13 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.98■□□□□ 0.95
Hdac9Q99N13 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac9Q99N13 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac9Q99N13 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac9Q99N13 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac9Q99N13 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hdac9Q99N13 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.97■□□□□ 0.95
Hdac9Q99N13 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.97■□□□□ 0.95
Hdac9Q99N13 Gm13474-201ENSMUST00000122466 815 ntBASIC20.97■□□□□ 0.95
Hdac9Q99N13 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.97■□□□□ 0.95
Hdac9Q99N13 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hdac9Q99N13 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hdac9Q99N13 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Hdac9Q99N13 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.97■□□□□ 0.95
Hdac9Q99N13 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Hdac9Q99N13 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
Hdac9Q99N13 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Hdac9Q99N13 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac9Q99N13 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac9Q99N13 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.96■□□□□ 0.95
Hdac9Q99N13 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac9Q99N13 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac9Q99N13 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac9Q99N13 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Hdac9Q99N13 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac9Q99N13 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac9Q99N13 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac9Q99N13 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hdac9Q99N13 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Hdac9Q99N13 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac9Q99N13 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac9Q99N13 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Hdac9Q99N13 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac9Q99N13 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac9Q99N13 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.95■□□□□ 0.94
Hdac9Q99N13 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac9Q99N13 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.95■□□□□ 0.94
Hdac9Q99N13 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac9Q99N13 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac9Q99N13 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac9Q99N13 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac9Q99N13 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac9Q99N13 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac9Q99N13 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac9Q99N13 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.95■□□□□ 0.94
Hdac9Q99N13 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac9Q99N13 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hdac9Q99N13 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac9Q99N13 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac9Q99N13 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.94■□□□□ 0.94
Hdac9Q99N13 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac9Q99N13 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.94■□□□□ 0.94
Hdac9Q99N13 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.94■□□□□ 0.94
Hdac9Q99N13 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Hdac9Q99N13 Gm7638-201ENSMUST00000121348 967 ntBASIC20.94■□□□□ 0.94
Hdac9Q99N13 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.94■□□□□ 0.94
Hdac9Q99N13 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac9Q99N13 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac9Q99N13 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac9Q99N13 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac9Q99N13 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac9Q99N13 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Hdac9Q99N13 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac9Q99N13 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Hdac9Q99N13 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac9Q99N13 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.93■□□□□ 0.94
Hdac9Q99N13 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac9Q99N13 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac9Q99N13 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Hdac9Q99N13 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac9Q99N13 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Hdac9Q99N13 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac9Q99N13 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac9Q99N13 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac9Q99N13 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac9Q99N13 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Hdac9Q99N13 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Hdac9Q99N13 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac9Q99N13 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac9Q99N13 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac9Q99N13 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac9Q99N13 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.92■□□□□ 0.94
Hdac9Q99N13 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Hdac9Q99N13 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms