Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.28■□□□□ 0.36
Rnf111Q99ML9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf111Q99ML9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf111Q99ML9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Rnf111Q99ML9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf111Q99ML9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf111Q99ML9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf111Q99ML9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf111Q99ML9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf111Q99ML9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.28■□□□□ 0.36
Rnf111Q99ML9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.27■□□□□ 0.36
Rnf111Q99ML9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf111Q99ML9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf111Q99ML9 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.27■□□□□ 0.36
Rnf111Q99ML9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf111Q99ML9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf111Q99ML9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf111Q99ML9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf111Q99ML9 Gm8969-201ENSMUST00000199694 526 ntBASIC17.27■□□□□ 0.36
Rnf111Q99ML9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.27■□□□□ 0.36
Rnf111Q99ML9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf111Q99ML9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Rnf111Q99ML9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf111Q99ML9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf111Q99ML9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf111Q99ML9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf111Q99ML9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf111Q99ML9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf111Q99ML9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf111Q99ML9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Gm6365-201ENSMUST00000054711 744 ntBASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf111Q99ML9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf111Q99ML9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf111Q99ML9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf111Q99ML9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf111Q99ML9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf111Q99ML9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf111Q99ML9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf111Q99ML9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf111Q99ML9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf111Q99ML9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf111Q99ML9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rnf111Q99ML9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf111Q99ML9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf111Q99ML9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf111Q99ML9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf111Q99ML9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rnf111Q99ML9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf111Q99ML9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rnf111Q99ML9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.24■□□□□ 0.35
Rnf111Q99ML9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf111Q99ML9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf111Q99ML9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf111Q99ML9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf111Q99ML9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf111Q99ML9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf111Q99ML9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf111Q99ML9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf111Q99ML9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf111Q99ML9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.24■□□□□ 0.35
Rnf111Q99ML9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf111Q99ML9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf111Q99ML9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf111Q99ML9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf111Q99ML9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf111Q99ML9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.24■□□□□ 0.35
Rnf111Q99ML9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf111Q99ML9 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.23■□□□□ 0.35
Rnf111Q99ML9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf111Q99ML9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf111Q99ML9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rnf111Q99ML9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf111Q99ML9 Gm37179-201ENSMUST00000194862 823 ntBASIC17.23■□□□□ 0.35
Rnf111Q99ML9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms