Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Scrt1Q99M85 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scrt1Q99M85 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Scrt1Q99M85 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scrt1Q99M85 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scrt1Q99M85 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scrt1Q99M85 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
Scrt1Q99M85 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scrt1Q99M85 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scrt1Q99M85 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.6■□□□□ 0.09
Scrt1Q99M85 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scrt1Q99M85 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scrt1Q99M85 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scrt1Q99M85 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scrt1Q99M85 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scrt1Q99M85 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.6■□□□□ 0.09
Scrt1Q99M85 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.6■□□□□ 0.09
Scrt1Q99M85 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scrt1Q99M85 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scrt1Q99M85 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.6■□□□□ 0.09
Scrt1Q99M85 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scrt1Q99M85 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scrt1Q99M85 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scrt1Q99M85 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.6■□□□□ 0.09
Scrt1Q99M85 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Scrt1Q99M85 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Scrt1Q99M85 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.59■□□□□ 0.09
Scrt1Q99M85 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.59■□□□□ 0.09
Scrt1Q99M85 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Scrt1Q99M85 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.58■□□□□ 0.09
Scrt1Q99M85 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scrt1Q99M85 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scrt1Q99M85 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scrt1Q99M85 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scrt1Q99M85 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scrt1Q99M85 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scrt1Q99M85 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scrt1Q99M85 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scrt1Q99M85 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scrt1Q99M85 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.58■□□□□ 0.08
Scrt1Q99M85 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scrt1Q99M85 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Scrt1Q99M85 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.58■□□□□ 0.08
Scrt1Q99M85 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Scrt1Q99M85 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Scrt1Q99M85 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scrt1Q99M85 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scrt1Q99M85 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scrt1Q99M85 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Scrt1Q99M85 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.58■□□□□ 0.08
Scrt1Q99M85 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scrt1Q99M85 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.58■□□□□ 0.08
Scrt1Q99M85 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scrt1Q99M85 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.57■□□□□ 0.08
Scrt1Q99M85 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Scrt1Q99M85 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scrt1Q99M85 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Scrt1Q99M85 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scrt1Q99M85 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Scrt1Q99M85 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.57■□□□□ 0.08
Scrt1Q99M85 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Scrt1Q99M85 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scrt1Q99M85 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scrt1Q99M85 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Scrt1Q99M85 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scrt1Q99M85 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Scrt1Q99M85 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Scrt1Q99M85 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Scrt1Q99M85 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scrt1Q99M85 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scrt1Q99M85 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scrt1Q99M85 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scrt1Q99M85 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scrt1Q99M85 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scrt1Q99M85 Gm18025-201ENSMUST00000221733 862 ntBASIC15.56■□□□□ 0.08
Scrt1Q99M85 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Scrt1Q99M85 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scrt1Q99M85 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scrt1Q99M85 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.56■□□□□ 0.08
Scrt1Q99M85 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms