Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm5075-201ENSMUST00000196916 622 ntBASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.84■□□□□ 0.29
Chmp1b1Q99LU0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp1b1Q99LU0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
Chmp1b1Q99LU0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp1b1Q99LU0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.84■□□□□ 0.29
Chmp1b1Q99LU0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp1b1Q99LU0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp1b1Q99LU0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp1b1Q99LU0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Chmp1b1Q99LU0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Chmp1b1Q99LU0 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.84■□□□□ 0.29
Chmp1b1Q99LU0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp1b1Q99LU0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp1b1Q99LU0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp1b1Q99LU0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp1b1Q99LU0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp1b1Q99LU0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp1b1Q99LU0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp1b1Q99LU0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp1b1Q99LU0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp1b1Q99LU0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp1b1Q99LU0 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.83■□□□□ 0.28
Chmp1b1Q99LU0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Chmp1b1Q99LU0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp1b1Q99LU0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp1b1Q99LU0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp1b1Q99LU0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.82■□□□□ 0.28
Chmp1b1Q99LU0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1b1Q99LU0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1b1Q99LU0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1b1Q99LU0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1b1Q99LU0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1b1Q99LU0 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.82■□□□□ 0.28
Chmp1b1Q99LU0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Chmp1b1Q99LU0 Gm6211-202ENSMUST00000167849 925 ntBASIC16.82■□□□□ 0.28
Chmp1b1Q99LU0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1b1Q99LU0 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.82■□□□□ 0.28
Chmp1b1Q99LU0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1b1Q99LU0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1b1Q99LU0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1b1Q99LU0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1b1Q99LU0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1b1Q99LU0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1b1Q99LU0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1b1Q99LU0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1b1Q99LU0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp1b1Q99LU0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp1b1Q99LU0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp1b1Q99LU0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Chmp1b1Q99LU0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Chmp1b1Q99LU0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Chmp1b1Q99LU0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp1b1Q99LU0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp1b1Q99LU0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp1b1Q99LU0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp1b1Q99LU0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp1b1Q99LU0 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.8■□□□□ 0.28
Chmp1b1Q99LU0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp1b1Q99LU0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp1b1Q99LU0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Chmp1b1Q99LU0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.79■□□□□ 0.28
Chmp1b1Q99LU0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp1b1Q99LU0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Chmp1b1Q99LU0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp1b1Q99LU0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp1b1Q99LU0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp1b1Q99LU0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp1b1Q99LU0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Chmp1b1Q99LU0 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms