Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.03■□□□□ 0.48
Smarcd2Q99JR8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcd2Q99JR8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.02■□□□□ 0.48
Smarcd2Q99JR8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcd2Q99JR8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcd2Q99JR8 Gm16061-201ENSMUST00000122167 857 ntBASIC18.02■□□□□ 0.48
Smarcd2Q99JR8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.02■□□□□ 0.48
Smarcd2Q99JR8 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.02■□□□□ 0.48
Smarcd2Q99JR8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcd2Q99JR8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcd2Q99JR8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcd2Q99JR8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smarcd2Q99JR8 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.02■□□□□ 0.47
Smarcd2Q99JR8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Smarcd2Q99JR8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Smarcd2Q99JR8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Smarcd2Q99JR8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Smarcd2Q99JR8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Smarcd2Q99JR8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.01■□□□□ 0.47
Smarcd2Q99JR8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcd2Q99JR8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcd2Q99JR8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcd2Q99JR8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.01■□□□□ 0.47
Smarcd2Q99JR8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.01■□□□□ 0.47
Smarcd2Q99JR8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcd2Q99JR8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcd2Q99JR8 Gm7638-201ENSMUST00000121348 967 ntBASIC18.01■□□□□ 0.47
Smarcd2Q99JR8 Gm24841-201ENSMUST00000158676 357 ntBASIC18.01■□□□□ 0.47
Smarcd2Q99JR8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcd2Q99JR8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcd2Q99JR8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcd2Q99JR8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Smarcd2Q99JR8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smarcd2Q99JR8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Gm13401-201ENSMUST00000117074 291 ntBASIC18■□□□□ 0.47
Smarcd2Q99JR8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18■□□□□ 0.47
Smarcd2Q99JR8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smarcd2Q99JR8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Tgds-204ENSMUST00000228543 1594 ntBASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smarcd2Q99JR8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcd2Q99JR8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcd2Q99JR8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Smarcd2Q99JR8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Smarcd2Q99JR8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Smarcd2Q99JR8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Smarcd2Q99JR8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcd2Q99JR8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcd2Q99JR8 Gm13474-201ENSMUST00000122466 815 ntBASIC17.98■□□□□ 0.47
Smarcd2Q99JR8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcd2Q99JR8 Gm7791-201ENSMUST00000219066 539 ntBASIC17.98■□□□□ 0.47
Smarcd2Q99JR8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Smarcd2Q99JR8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcd2Q99JR8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Smarcd2Q99JR8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Smarcd2Q99JR8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.98■□□□□ 0.47
Smarcd2Q99JR8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcd2Q99JR8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smarcd2Q99JR8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Smarcd2Q99JR8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcd2Q99JR8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Smarcd2Q99JR8 Gm25016-201ENSMUST00000158399 131 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms