Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc4Q99J62 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc4Q99J62 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.56■□□□□ 0.88
Rfc4Q99J62 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfc4Q99J62 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rfc4Q99J62 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc4Q99J62 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc4Q99J62 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc4Q99J62 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc4Q99J62 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc4Q99J62 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc4Q99J62 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Rfc4Q99J62 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc4Q99J62 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.55■□□□□ 0.88
Rfc4Q99J62 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc4Q99J62 Gm18101-201ENSMUST00000215769 548 ntBASIC20.55■□□□□ 0.88
Rfc4Q99J62 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc4Q99J62 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc4Q99J62 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc4Q99J62 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc4Q99J62 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc4Q99J62 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc4Q99J62 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc4Q99J62 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfc4Q99J62 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfc4Q99J62 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfc4Q99J62 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfc4Q99J62 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.54■□□□□ 0.88
Rfc4Q99J62 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfc4Q99J62 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.54■□□□□ 0.88
Rfc4Q99J62 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.54■□□□□ 0.88
Rfc4Q99J62 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfc4Q99J62 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfc4Q99J62 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rfc4Q99J62 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfc4Q99J62 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfc4Q99J62 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfc4Q99J62 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfc4Q99J62 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rfc4Q99J62 Gm22697-201ENSMUST00000175194 63 ntBASIC20.53■□□□□ 0.88
Rfc4Q99J62 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfc4Q99J62 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.53■□□□□ 0.88
Rfc4Q99J62 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfc4Q99J62 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfc4Q99J62 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.53■□□□□ 0.88
Rfc4Q99J62 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfc4Q99J62 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfc4Q99J62 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Rfc4Q99J62 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfc4Q99J62 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rfc4Q99J62 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rfc4Q99J62 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfc4Q99J62 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfc4Q99J62 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.52■□□□□ 0.88
Rfc4Q99J62 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.52■□□□□ 0.87
Rfc4Q99J62 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Rfc4Q99J62 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Rfc4Q99J62 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.51■□□□□ 0.87
Rfc4Q99J62 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfc4Q99J62 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Rfc4Q99J62 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Rfc4Q99J62 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rfc4Q99J62 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfc4Q99J62 Gm14859-201ENSMUST00000117752 357 ntBASIC20.51■□□□□ 0.87
Rfc4Q99J62 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfc4Q99J62 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfc4Q99J62 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfc4Q99J62 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfc4Q99J62 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfc4Q99J62 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfc4Q99J62 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfc4Q99J62 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfc4Q99J62 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rfc4Q99J62 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc4Q99J62 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.5■□□□□ 0.87
Rfc4Q99J62 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rfc4Q99J62 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.5■□□□□ 0.87
Rfc4Q99J62 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc4Q99J62 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc4Q99J62 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc4Q99J62 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc4Q99J62 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc4Q99J62 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc4Q99J62 Gm4974-201ENSMUST00000209974 875 ntBASIC20.5■□□□□ 0.87
Rfc4Q99J62 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc4Q99J62 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc4Q99J62 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc4Q99J62 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rfc4Q99J62 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.5■□□□□ 0.87
Rfc4Q99J62 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rfc4Q99J62 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.5■□□□□ 0.87
Rfc4Q99J62 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfc4Q99J62 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rfc4Q99J62 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfc4Q99J62 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Rfc4Q99J62 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfc4Q99J62 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfc4Q99J62 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.49■□□□□ 0.87
Rfc4Q99J62 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Rfc4Q99J62 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms