Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col20a1Q923P0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col20a1Q923P0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col20a1Q923P0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col20a1Q923P0 Gm13401-201ENSMUST00000117074 291 ntBASIC21.05■□□□□ 0.96
Col20a1Q923P0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col20a1Q923P0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.05■□□□□ 0.96
Col20a1Q923P0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC21.05■□□□□ 0.96
Col20a1Q923P0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.05■□□□□ 0.96
Col20a1Q923P0 Gm9694-201ENSMUST00000193347 1189 ntBASIC21.05■□□□□ 0.96
Col20a1Q923P0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col20a1Q923P0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.05■□□□□ 0.96
Col20a1Q923P0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Col20a1Q923P0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col20a1Q923P0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col20a1Q923P0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col20a1Q923P0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col20a1Q923P0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col20a1Q923P0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col20a1Q923P0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col20a1Q923P0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col20a1Q923P0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Col20a1Q923P0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col20a1Q923P0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col20a1Q923P0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col20a1Q923P0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col20a1Q923P0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col20a1Q923P0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.04■□□□□ 0.96
Col20a1Q923P0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col20a1Q923P0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Col20a1Q923P0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col20a1Q923P0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col20a1Q923P0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col20a1Q923P0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col20a1Q923P0 Gm38027-201ENSMUST00000192315 235 ntBASIC21.04■□□□□ 0.96
Col20a1Q923P0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col20a1Q923P0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col20a1Q923P0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col20a1Q923P0 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.03■□□□□ 0.96
Col20a1Q923P0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Col20a1Q923P0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col20a1Q923P0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.03■□□□□ 0.96
Col20a1Q923P0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.03■□□□□ 0.96
Col20a1Q923P0 Gm10231-201ENSMUST00000181584 441 ntBASIC21.03■□□□□ 0.96
Col20a1Q923P0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col20a1Q923P0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col20a1Q923P0 Gm10175-202ENSMUST00000208752 441 ntBASIC21.03■□□□□ 0.96
Col20a1Q923P0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col20a1Q923P0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col20a1Q923P0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col20a1Q923P0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col20a1Q923P0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col20a1Q923P0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col20a1Q923P0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.02■□□□□ 0.96
Col20a1Q923P0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col20a1Q923P0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col20a1Q923P0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.02■□□□□ 0.95
Col20a1Q923P0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.02■□□□□ 0.95
Col20a1Q923P0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col20a1Q923P0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col20a1Q923P0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col20a1Q923P0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col20a1Q923P0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col20a1Q923P0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col20a1Q923P0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col20a1Q923P0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Col20a1Q923P0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col20a1Q923P0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Col20a1Q923P0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col20a1Q923P0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col20a1Q923P0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col20a1Q923P0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col20a1Q923P0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col20a1Q923P0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col20a1Q923P0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Col20a1Q923P0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Col20a1Q923P0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col20a1Q923P0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col20a1Q923P0 Gm27463-201ENSMUST00000183569 57 ntBASIC21■□□□□ 0.95
Col20a1Q923P0 Gm7889-201ENSMUST00000185591 958 ntBASIC21■□□□□ 0.95
Col20a1Q923P0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Col20a1Q923P0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Col20a1Q923P0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col20a1Q923P0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.99■□□□□ 0.95
Col20a1Q923P0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col20a1Q923P0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Col20a1Q923P0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Col20a1Q923P0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col20a1Q923P0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col20a1Q923P0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col20a1Q923P0 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.99■□□□□ 0.95
Col20a1Q923P0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col20a1Q923P0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col20a1Q923P0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col20a1Q923P0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col20a1Q923P0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col20a1Q923P0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col20a1Q923P0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.99■□□□□ 0.95
Col20a1Q923P0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col20a1Q923P0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms