Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Gm42545-201ENSMUST00000202755 922 ntBASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Gm10252-201ENSMUST00000209541 832 ntBASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb20Q91XZ9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb20Q91XZ9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb20Q91XZ9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.11■□□□□ 0.33
Pcdhb20Q91XZ9 Mir1199-201ENSMUST00000117015 119 ntBASIC17.11■□□□□ 0.33
Pcdhb20Q91XZ9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdhb20Q91XZ9 Gm36991-201ENSMUST00000191800 648 ntBASIC17.11■□□□□ 0.33
Pcdhb20Q91XZ9 Gm43183-201ENSMUST00000200632 547 ntBASIC17.11■□□□□ 0.33
Pcdhb20Q91XZ9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdhb20Q91XZ9 AC125117.2-201ENSMUST00000228344 1140 ntBASIC17.11■□□□□ 0.33
Pcdhb20Q91XZ9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb20Q91XZ9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdhb20Q91XZ9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.11■□□□□ 0.33
Pcdhb20Q91XZ9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb20Q91XZ9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb20Q91XZ9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb20Q91XZ9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb20Q91XZ9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb20Q91XZ9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb20Q91XZ9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb20Q91XZ9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb20Q91XZ9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhb20Q91XZ9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb20Q91XZ9 Mir2861-201ENSMUST00000175539 82 ntBASIC17.1■□□□□ 0.33
Pcdhb20Q91XZ9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb20Q91XZ9 AC159246.1-201ENSMUST00000214478 249 ntBASIC17.1■□□□□ 0.33
Pcdhb20Q91XZ9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb20Q91XZ9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb20Q91XZ9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb20Q91XZ9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.1■□□□□ 0.33
Pcdhb20Q91XZ9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb20Q91XZ9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb20Q91XZ9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb20Q91XZ9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb20Q91XZ9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb20Q91XZ9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb20Q91XZ9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb20Q91XZ9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb20Q91XZ9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb20Q91XZ9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb20Q91XZ9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Pcdhb20Q91XZ9 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb20Q91XZ9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb20Q91XZ9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Pcdhb20Q91XZ9 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
Pcdhb20Q91XZ9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb20Q91XZ9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhb20Q91XZ9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb20Q91XZ9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb20Q91XZ9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb20Q91XZ9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb20Q91XZ9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb20Q91XZ9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Pcdhb20Q91XZ9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb20Q91XZ9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb20Q91XZ9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb20Q91XZ9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhb20Q91XZ9 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.08■□□□□ 0.32
Pcdhb20Q91XZ9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb20Q91XZ9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb20Q91XZ9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb20Q91XZ9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb20Q91XZ9 AC107452.3-201ENSMUST00000228807 1308 ntBASIC17.08■□□□□ 0.32
Pcdhb20Q91XZ9 Gm12382-201ENSMUST00000122005 922 ntBASIC17.08■□□□□ 0.32
Pcdhb20Q91XZ9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.08■□□□□ 0.32
Pcdhb20Q91XZ9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.08■□□□□ 0.32
Pcdhb20Q91XZ9 Gm37292-201ENSMUST00000192062 758 ntBASIC17.08■□□□□ 0.32
Pcdhb20Q91XZ9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.08■□□□□ 0.32
Pcdhb20Q91XZ9 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.08■□□□□ 0.32
Pcdhb20Q91XZ9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb20Q91XZ9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb20Q91XZ9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb20Q91XZ9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb20Q91XZ9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb20Q91XZ9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdhb20Q91XZ9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb20Q91XZ9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb20Q91XZ9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb20Q91XZ9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb20Q91XZ9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhb20Q91XZ9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb20Q91XZ9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms