Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb6Q91XZ4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdhb6Q91XZ4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb6Q91XZ4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb6Q91XZ4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb6Q91XZ4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb6Q91XZ4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb6Q91XZ4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb6Q91XZ4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb6Q91XZ4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhb6Q91XZ4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Pcdhb6Q91XZ4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.31■□□□□ 0.52
Pcdhb6Q91XZ4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhb6Q91XZ4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhb6Q91XZ4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.31■□□□□ 0.52
Pcdhb6Q91XZ4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb6Q91XZ4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb6Q91XZ4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.31■□□□□ 0.52
Pcdhb6Q91XZ4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb6Q91XZ4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb6Q91XZ4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb6Q91XZ4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhb6Q91XZ4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb6Q91XZ4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb6Q91XZ4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Gm29791-202ENSMUST00000207888 369 ntBASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb6Q91XZ4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb6Q91XZ4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb6Q91XZ4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb6Q91XZ4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb6Q91XZ4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb6Q91XZ4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb6Q91XZ4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb6Q91XZ4 Gm10138-203ENSMUST00000206952 366 ntBASIC18.29■□□□□ 0.52
Pcdhb6Q91XZ4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb6Q91XZ4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb6Q91XZ4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb6Q91XZ4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb6Q91XZ4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb6Q91XZ4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb6Q91XZ4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb6Q91XZ4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb6Q91XZ4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb6Q91XZ4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb6Q91XZ4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 Gm10418-201ENSMUST00000100943 576 ntBASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 Mir6349-201ENSMUST00000184059 97 ntBASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.28■□□□□ 0.52
Pcdhb6Q91XZ4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb6Q91XZ4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb6Q91XZ4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb6Q91XZ4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb6Q91XZ4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
Pcdhb6Q91XZ4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb6Q91XZ4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb6Q91XZ4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.27■□□□□ 0.52
Pcdhb6Q91XZ4 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.27■□□□□ 0.52
Pcdhb6Q91XZ4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb6Q91XZ4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms