Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb8Q91XZ2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb8Q91XZ2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb8Q91XZ2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.4■□□□□ 0.38
Pcdhb8Q91XZ2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhb8Q91XZ2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb8Q91XZ2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhb8Q91XZ2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb8Q91XZ2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb8Q91XZ2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
Pcdhb8Q91XZ2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb8Q91XZ2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb8Q91XZ2 Gm2399-201ENSMUST00000104944 225 ntBASIC17.39■□□□□ 0.37
Pcdhb8Q91XZ2 Gm12933-201ENSMUST00000120203 872 ntBASIC17.39■□□□□ 0.37
Pcdhb8Q91XZ2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.39■□□□□ 0.37
Pcdhb8Q91XZ2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb8Q91XZ2 Gm44549-201ENSMUST00000208351 577 ntBASIC17.39■□□□□ 0.37
Pcdhb8Q91XZ2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb8Q91XZ2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb8Q91XZ2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb8Q91XZ2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb8Q91XZ2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb8Q91XZ2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb8Q91XZ2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb8Q91XZ2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb8Q91XZ2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb8Q91XZ2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb8Q91XZ2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
Pcdhb8Q91XZ2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb8Q91XZ2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdhb8Q91XZ2 Rab3c-203ENSMUST00000224180 967 ntBASIC17.38■□□□□ 0.37
Pcdhb8Q91XZ2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb8Q91XZ2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb8Q91XZ2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb8Q91XZ2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb8Q91XZ2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb8Q91XZ2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb8Q91XZ2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb8Q91XZ2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb8Q91XZ2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb8Q91XZ2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb8Q91XZ2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhb8Q91XZ2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb8Q91XZ2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb8Q91XZ2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb8Q91XZ2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb8Q91XZ2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb8Q91XZ2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pcdhb8Q91XZ2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb8Q91XZ2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb8Q91XZ2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb8Q91XZ2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb8Q91XZ2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb8Q91XZ2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb8Q91XZ2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb8Q91XZ2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb8Q91XZ2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb8Q91XZ2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb8Q91XZ2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb8Q91XZ2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb8Q91XZ2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb8Q91XZ2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb8Q91XZ2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.35■□□□□ 0.37
Pcdhb8Q91XZ2 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.35■□□□□ 0.37
Pcdhb8Q91XZ2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcdhb8Q91XZ2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.34■□□□□ 0.37
Pcdhb8Q91XZ2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb8Q91XZ2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Pcdhb8Q91XZ2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb8Q91XZ2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb8Q91XZ2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb8Q91XZ2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb8Q91XZ2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb8Q91XZ2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb8Q91XZ2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb8Q91XZ2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb8Q91XZ2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb8Q91XZ2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb8Q91XZ2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb8Q91XZ2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms